| 1. | The Legend of Zelda: Spirit Tracks | 8,221,500 | 10.12% | 1 | 0:16 |
| 2. | Star Fox 64 | 7,830,669 | 9.64% | 14 | 3:10:36 |
| 3. | Super Mario Bros. 3 | 7,774,849 | 9.57% | 25 | 6:05:18 |
| 4. | Duck Hunt | 7,360,043 | 9.06% | 6 | 18:36 |
| 5. | Street Fighter II | 6,060,415 | 7.46% | 5 | 7:27 |
| 6. | GoldenEye 007 | 2,838,038 | 3.49% | 3 | 12:45 |
| 7. | F-Zero | 2,407,874 | 2.96% | 5 | 2:18:13 |
| 8. | Super Mario World | 2,136,878 | 2.63% | 19 | 3:38:57 |
| 9. | Mario Bros. | 1,939,275 | 2.39% | 7 | 24:54 |
| 10. | God of War | 1,447,447 | 1.78% | 1 | 0:26 |
| 11. | Mega Man 5 | 1,415,919 | 1.74% | 3 | 1:36 |
| 12. | Super Mario 64 | 1,330,363 | 1.64% | 10 | 4:28:12 |
| 13. | Star Fox | 1,213,906 | 1.49% | 5 | 2:20:36 |
| 14. | Super Smash Bros. Melee | 1,117,087 | 1.37% | 4 | 2:53 |
| 15. | Super Mario Bros. 2 | 1,037,134 | 1.28% | 1 | 0:53 |
| 16. | The Legend of Zelda: Ocarina of Time | 983,393 | 1.21% | 14 | 2:59:20 |
| 17. | SpongeBob SquarePants: SuperSponge | 933,119 | 1.15% | 1 | 0:51 |
| 18. | Star Wars Episode I: Racer | 893,998 | 1.10% | 2 | 5:59 |
| 19. | Teenage Mutant Ninja Turtles: Manhattan Missions | 784,534 | 0.97% | 1 | 0:20 |
| 20. | The Legend of Zelda: Breath of the Wild | 783,369 | 0.96% | 13 | 1:01:06 |
| 21. | Resident Evil 4 | 722,768 | 0.89% | 3 | 2:11 |
| 22. | The Legend of Zelda: Tears of the Kingdom | 673,202 | 0.83% | 6 | 52:02 |
| 23. | Mario Kart: Double Dash!! | 643,942 | 0.79% | 6 | 39:06 |
| 24. | Super Smash Bros. | 600,797 | 0.74% | 11 | 1:07:28 |
| 25. | Super Mario Bros. | 556,046 | 0.68% | 13 | 49:19 |
| 26. | Bomberman 64 | 468,820 | 0.58% | 1 | 0:59 |
| 27. | NES Remix Pack | 414,101 | 0.51% | 1 | 0:51 |
| 28. | Punch-Out!! | 372,306 | 0.46% | 3 | 2:18:11 |
| 29. | The Legend of Zelda: The Minish Cap | 369,726 | 0.46% | 3 | 11:31 |
| 30. | The Legend of Zelda: Link's Awakening | 367,048 | 0.45% | 3 | 1:10:59 |
| 31. | Mario Kart 8 | 340,376 | 0.42% | 2 | 4:55 |
| 32. | Super Mario Bros. / Duck Hunt | 320,701 | 0.39% | 4 | 12:21 |
| 33. | Fortnite | 315,762 | 0.39% | 6 | 4:38:34 |
| 34. | Marvel vs. Capcom: Clash of Super Heroes | 302,891 | 0.37% | 3 | 1:53 |
| 35. | Felix the Cat | 302,782 | 0.37% | 2 | 1:12 |
| 36. | Super Punch-Out!! | 301,392 | 0.37% | 11 | 4:01:39 |
| 37. | Mega Man 2 | 264,693 | 0.33% | 7 | 14:34 |
| 38. | Yoshi's Island | 251,742 | 0.31% | 2 | 10:32 |
| 39. | Donkey Kong Country | 251,162 | 0.31% | 11 | 39:57 |
| 40. | Mario Kart Wii | 250,707 | 0.31% | 1 | 0:45 |
| 41. | Conker's Bad Fur Day | 223,426 | 0.27% | 3 | 9:02 |
| 42. | Mario Kart 64 | 212,652 | 0.26% | 5 | 13:33 |
| 43. | The Legend of Zelda: The Wind Waker | 204,805 | 0.25% | 2 | 6:41 |
| 44. | Mega Man X | 197,618 | 0.24% | 10 | 5:05:08 |
| 45. | Super Mario Advance 4: Super Mario Bros. 3 | 167,151 | 0.21% | 1 | 0:45 |
| 46. | Cooking Mama | 165,268 | 0.20% | 1 | 0:25 |
| 47. | Donkey Kong Land 2 | 159,750 | 0.20% | 2 | 11:17 |
| 48. | Super Mario Land | 156,328 | 0.19% | 6 | 4:18:11 |
| 49. | Wario Land 3 | 150,166 | 0.18% | 1 | 0:59 |
| 50. | The Legend of Zelda: Majora's Mask | 115,861 | 0.14% | 6 | 6:20:20 |
| 51. | Castlevania: Rondo of Blood | 100,693 | 0.12% | 1 | 0:54 |
| 52. | Super Mario Galaxy | 86,889 | 0.11% | 2 | 19:49 |
| 53. | The Jetsons: Cogswell's Caper! | 75,792 | 0.09% | 1 | 0:58 |
| 54. | Chip 'n Dale Rescue Rangers | 73,565 | 0.09% | 6 | 1:06:30 |
| 55. | Snow Bros. | 69,968 | 0.09% | 7 | 3:39:51 |
| 56. | Pinball | 68,428 | 0.08% | 1 | 0:46 |
| 57. | DuckTales | 63,280 | 0.08% | 4 | 12:11 |
| 58. | Super Mario Bros. Wonder | 61,965 | 0.08% | 7 | 2:11:21 |
| 59. | Super Mario World 2: Yoshi's Island | 61,777 | 0.08% | 8 | 4:26:34 |
| 60. | Contra III: The Alien Wars | 61,052 | 0.08% | 5 | 2:25:45 |
| 61. | The King of Fighters '99 | 59,347 | 0.07% | 5 | 2:00:59 |
| 62. | The Little Mermaid | 55,924 | 0.07% | 2 | 11:32 |
| 63. | Double Dragon | 53,861 | 0.07% | 2 | 7:43 |
| 64. | Super Metroid | 50,858 | 0.06% | 7 | 2:49:15 |
| 65. | Super Mario Sunshine | 50,731 | 0.06% | 4 | 9:26 |
| 66. | Metroid | 49,033 | 0.06% | 6 | 1:32:08 |
| 67. | Virtual Boy Wario Land | 48,705 | 0.06% | 1 | 0:24 |
| 68. | The Simpsons: Bart's Nightmare | 47,820 | 0.06% | 4 | 1:30:10 |
| 69. | Super Ghouls 'n Ghosts | 46,058 | 0.06% | 2 | 1:22 |
| 70. | Mickey Mousecapade | 44,696 | 0.06% | 1 | 0:19 |
| 71. | Minecraft | 43,924 | 0.05% | 2 | 11:48 |
| 72. | Mario Kart 8 Deluxe | 43,341 | 0.05% | 3 | 17:57 |
| 73. | The Simpsons: Road Rage | 40,891 | 0.05% | 1 | 0:46 |
| 74. | Speedy Gonzales: Los Gatos Bandidos | 40,573 | 0.05% | 1 | 0:35 |
| 75. | Mega Man | 40,067 | 0.05% | 8 | 2:28:37 |
| 76. | Zelda II: The Adventure of Link | 39,121 | 0.05% | 5 | 41:22 |
| 77. | Pac-Man | 36,697 | 0.05% | 4 | 24:36 |
| 78. | Jaws | 35,493 | 0.04% | 3 | 1:19:02 |
| 79. | Mega Man 7 | 35,454 | 0.04% | 5 | 19:11 |
| 80. | Super Mario Advance | 34,545 | 0.04% | 2 | 2:45:54 |
| 81. | Pokémon FireRed and LeafGreen | 34,344 | 0.04% | 3 | 6:13 |
| 82. | The Last of Us | 33,595 | 0.04% | 3 | 5:38:30 |
| 83. | Kirby's Adventure | 33,335 | 0.04% | 2 | 0:54 |
| 84. | Super Smash Bros. for Wii U | 32,606 | 0.04% | 2 | 2:03:07 |
| 85. | Alien Hominid | 32,392 | 0.04% | 4 | 47:01 |
| 86. | The Legend of Zelda: Skyward Sword | 31,843 | 0.04% | 2 | 5:46 |
| 87. | The King of Fighters: Dream Match 1999 | 30,759 | 0.04% | 1 | 0:57 |
| 88. | The Legend of Zelda: Oracle of Ages | 30,317 | 0.04% | 1 | 0:30 |
| 89. | Monsters, Inc. | 29,873 | 0.04% | 1 | 0:30 |
| 90. | Super Mario Bros. Deluxe | 29,159 | 0.04% | 1 | 0:50 |
| 91. | Cuphead | 27,742 | 0.03% | 7 | 6:02:30 |
| 92. | Contra 4 | 27,679 | 0.03% | 2 | 9:49 |
| 93. | WarioWare: Smooth Moves | 27,537 | 0.03% | 1 | 0:25 |
| 94. | The Legend of Zelda: A Link to the Past | 26,019 | 0.03% | 6 | 3:19:12 |
| 95. | Gran Turismo 4 | 25,339 | 0.03% | 1 | 0:50 |
| 96. | Battletoads/Double Dragon | 24,780 | 0.03% | 1 | 0:25 |
| 97. | Crazy Taxi | 24,388 | 0.03% | 3 | 2:12:00 |
| 98. | Angry Birds | 24,099 | 0.03% | 1 | 0:38 |
| 99. | Pilotwings | 23,687 | 0.03% | 3 | 9:51 |
| 100. | Gradius | 22,805 | 0.03% | 1 | 0:08 |
