| 1. | Michael Jackson's Moonwalker | 87,399 | 51.21% | 6 | 1:28:19 |
| 2. | Super Mario Bros. | 2,363 | 1.38% | 8 | 2:01:17 |
| 3. | Lode Runner | 2,187 | 1.28% | 15 | 2:02:20 |
| 4. | Final Fantasy V | 1,751 | 1.03% | 36 | 19:59:08 |
| 5. | Dragon Ball Z: Supersonic Warriors | 1,737 | 1.02% | 10 | 3:47:41 |
| 6. | Dragon Ball: Advanced Adventure | 1,546 | 0.91% | 14 | 4:20:05 |
| 7. | Final Fight 2 | 1,432 | 0.84% | 1 | 1:06:26 |
| 8. | WarioWare, Inc.: Mega Microgames! | 1,336 | 0.78% | 5 | 12:28 |
| 9. | Super Fire Pro Wrestling: Queen's Special | 1,164 | 0.68% | 13 | 1:53:13 |
| 10. | Captain Tsubasa | 615 | 0.36% | 14 | 3:57:34 |
| 11. | Final Fight | 568 | 0.33% | 2 | 1:22:26 |
| 12. | Tetris | 555 | 0.33% | 7 | 1:32:12 |
| 13. | OutRun 2006: Coast 2 Coast | 549 | 0.32% | 2 | 20:07 |
| 14. | Space Harrier | 534 | 0.31% | 2 | 19:35 |
| 15. | Sonic the Hedgehog | 473 | 0.28% | 5 | 2:46:14 |
| 16. | Parodius! From Myth to Laughter | 443 | 0.26% | 2 | 2:05:34 |
| 17. | Rhythm Heaven | 421 | 0.25% | 4 | 48:58 |
| 18. | Mr. Do! | 342 | 0.20% | 2 | 7:47 |
| 19. | Kamaitachi no Yoru | 327 | 0.19% | 20 | 7:58:16 |
| 20. | Star Soldier | 296 | 0.17% | 1 | 4:05 |
| 21. | Atomic Punk | 289 | 0.17% | 1 | 5:11 |
| 22. | Disney's Kim Possible 2: Drakken's Demise | 278 | 0.16% | 16 | 2:36:45 |
| 23. | ChuChu Rocket! | 263 | 0.15% | 1 | 9:19 |
| 24. | Monster Attack | 258 | 0.15% | 2 | 51:13 |
| 25. | Revolution X | 257 | 0.15% | 1 | 7:32 |
| 26. | Streets of Rage 3 | 257 | 0.15% | 1 | 16:05 |
| 27. | Virtua Racing | 256 | 0.15% | 1 | 3:47 |
| 28. | Kid Dracula | 233 | 0.14% | 1 | 0:57 |
| 29. | Double Dragon II | 231 | 0.14% | 1 | 24:51 |
| 30. | Kirby's Adventure | 230 | 0.13% | 9 | 1:23:45 |
| 31. | Disney's Aladdin | 224 | 0.13% | 5 | 31:36 |
| 32. | Ultraman Fighting Evolution 3 | 205 | 0.12% | 1 | 2:57 |
| 33. | Shin Megami Tensei | 187 | 0.11% | 1 | 7:59 |
| 34. | Ultraman: Towards the Future | 186 | 0.11% | 1 | 2:18 |
| 35. | Super Fire Pro Wrestling X | 185 | 0.11% | 1 | 5:14 |
| 36. | Tsuyoshi Shikkari Shinasai: Taisen Puzzle-dama | 161 | 0.09% | 1 | 10:44 |
| 37. | Kirby's Dream Land 2 | 158 | 0.09% | 4 | 55:32 |
| 38. | The Hybrid Front | 151 | 0.09% | 1 | 44:19 |
| 39. | Verytex | 150 | 0.09% | 1 | 6:58 |
| 40. | Super Bomberman 4 | 136 | 0.08% | 3 | 45:03 |
| 41. | Landstalker | 136 | 0.08% | 2 | 4:10 |
| 42. | Pop'n Music Mickey Tunes | 135 | 0.08% | 1 | 11:49 |
| 43. | Argus | 135 | 0.08% | 1 | 2:10 |
| 44. | Chelnov | 129 | 0.08% | 2 | 51:37 |
| 45. | Gargoyle's Quest | 128 | 0.07% | 6 | 1:12:56 |
| 46. | Baseball Simulator 1.000 | 124 | 0.07% | 1 | 23:14 |
| 47. | Street Fighter II | 124 | 0.07% | 1 | 13:41 |
| 48. | Bomberman | 124 | 0.07% | 1 | 50:42 |
| 49. | Harvest Moon | 119 | 0.07% | 1 | 18:18 |
| 50. | Super Mario World | 117 | 0.07% | 3 | 16:20 |
| 51. | Party Quiz Mega Q | 116 | 0.07% | 2 | 23:22 |
| 52. | Tennis | 112 | 0.07% | 2 | 19:37 |
| 53. | Pingus | 110 | 0.06% | 1 | 0:58 |
| 54. | Morita Shogi 64 | 108 | 0.06% | 2 | 24:23 |
| 55. | F-Zero | 105 | 0.06% | 1 | 3:01 |
| 56. | Mario's Super Picross | 97 | 0.06% | 1 | 28:58 |
| 57. | Puyo Puyo 2 | 92 | 0.05% | 4 | 1:19:28 |
| 58. | Ghosts 'n Goblins | 91 | 0.05% | 3 | 7:51 |
| 59. | Rhythm Tengoku | 82 | 0.05% | 2 | 10:37 |
| 60. | Dragon's Revenge | 81 | 0.05% | 1 | 16:32 |
| 61. | Galaxian | 80 | 0.05% | 1 | 3:40 |
| 62. | Kidou Gekidan Haro Ichiza: Haro no Puyo Puyo | 79 | 0.05% | 2 | 1:38:07 |
| 63. | Gunstar Heroes | 75 | 0.04% | 2 | 1:21:12 |
| 64. | Nobunaga's Ambition: Lord of Darkness | 73 | 0.04% | 2 | 4:19:20 |
| 65. | Jaki Crush | 68 | 0.04% | 1 | 12:29 |
| 66. | Puyo Puyo Sun | 66 | 0.04% | 2 | 15:17 |
| 67. | Lethal Enforcers II: Gun Fighters | 63 | 0.04% | 1 | 16:55 |
| 68. | Super Bomberman 5 | 63 | 0.04% | 3 | 1:11:11 |
| 69. | Ninja Hattori-kun | 61 | 0.04% | 1 | 1:31 |
| 70. | Kaeru no Tame ni Kane wa Naru | 61 | 0.04% | 5 | 8:26:29 |
| 71. | R-Type II | 59 | 0.03% | 1 | 22:43 |
| 72. | DuckTales | 56 | 0.03% | 1 | 24:27 |
| 73. | Truxton | 55 | 0.03% | 1 | 29:58 |
| 74. | Invader | 55 | 0.03% | 1 | 8:07 |
| 75. | Activision Anthology | 54 | 0.03% | 3 | 15:06 |
| 76. | Dr. Mario | 52 | 0.03% | 1 | 8:09 |
| 77. | Kid Niki: Radical Ninja | 51 | 0.03% | 1 | 44:08 |
| 78. | Fire Pro Wrestling Returns | 51 | 0.03% | 2 | 4:34 |
| 79. | Balloon Kid | 50 | 0.03% | 4 | 49:19 |
| 80. | Tetris Plus | 49 | 0.03% | 2 | 17:14 |
| 81. | Burai Fighter | 49 | 0.03% | 2 | 37:06 |
| 82. | Harukanaru Toki no Naka de | 47 | 0.03% | 1 | 50:54 |
| 83. | Kung-Fu Master | 47 | 0.03% | 1 | 7:56 |
| 84. | Contra III: The Alien Wars | 47 | 0.03% | 1 | 6:05 |
| 85. | Qix | 45 | 0.03% | 1 | 20:56 |
| 86. | Kwirk | 45 | 0.03% | 2 | 18:53 |
| 87. | Devilish | 41 | 0.02% | 1 | 10:38 |
| 88. | TwinBee | 39 | 0.02% | 1 | 0:57 |
| 89. | NCAA Basketball | 39 | 0.02% | 1 | 20:57 |
| 90. | Kirby's Dream Land | 39 | 0.02% | 1 | 39:45 |
| 91. | Super Soccer | 38 | 0.02% | 1 | 12:24 |
| 92. | Thunder Force IV | 38 | 0.02% | 2 | 15:03 |
| 93. | Harvest Moon 2 GBC | 38 | 0.02% | 1 | 1:48 |
| 94. | Mario Bros. | 38 | 0.02% | 2 | 32:03 |
| 95. | Metroid: Zero Mission | 38 | 0.02% | 1 | 6:17 |
| 96. | Fatal Fury: King of Fighters | 37 | 0.02% | 1 | 22:45 |
| 97. | Game Boy Wars | 37 | 0.02% | 1 | 2:42 |
| 98. | Starship Hector | 36 | 0.02% | 1 | 8:02 |
| 99. | Mario vs. Donkey Kong | 35 | 0.02% | 1 | 2:58 |
| 100. | Flicky | 35 | 0.02% | 1 | 4:07 |
