| 1. | Metroid Prime Part 29 Center | 29 | | Metroid Prime
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| 2. | Metroid Prime Part 1 Tallon IV | 11 | | Metroid Prime
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| 3. | Metroid Prime Part 26 Grappling | 11 | | Metroid Prime
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| 4. | Metroid Prime Part 23 SAVE! | 9 | | Metroid Prime
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| 5. | Metroid Prime Part 31 Meta | 8 | | Metroid Prime
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| 6. | Metroid Prime Part 13 Door | 7 | | Metroid Prime
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| 7. | Metroid Prime Part 30 Artifacts | 7 | | Metroid Prime
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| 8. | Metroid Prime Part 10 Sheegoth | 7 | | Metroid Prime
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| 9. | Metroid Prime Part 22 Colours | 6 | | Metroid Prime
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| 10. | Metroid Prime Part 11 Courtyard | 6 | | Metroid Prime
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| 11. | Metroid Prime Part 15 Spider | 6 | | Metroid Prime
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| 12. | Metroid Prime Part 14 Thardus | 5 | | Metroid Prime
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| 13. | Metroid Prime Part 12 Visor | 5 | | Metroid Prime
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| 14. | Metroid Prime Part 19 Gravity | 5 | | Metroid Prime
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| 15. | Metroid Prime Part 16 Core | 5 | | Metroid Prime
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| 16. | Metroid Prime Part 25 X Ray | 5 | | Metroid Prime
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| 17. | Metroid Prime Part 27 Plasma | 5 | | Metroid Prime
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| 18. | Metroid Prime Part 20 Cargo | 5 | | Metroid Prime
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| 19. | Metroid Prime Part 24 Power | 5 | | Metroid Prime
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| 20. | Metroid Prime Part 6 Symbols | 5 | | Metroid Prime
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| 21. | Metroid Prime Part 4 Bombs | 4 | | Metroid Prime
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| 22. | Metroid Prime Part 21 Mines | 4 | | Metroid Prime
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| 23. | Metroid Prime Part 17 Ice | 4 | | Metroid Prime
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| 24. | Metroid Prime Part 18 Frozen | 3 | | Metroid Prime
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| 25. | Metroid Prime Part 3 Ball | 3 | | Metroid Prime
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| 26. | Metroid Prime Part 8 Phendrana Drifts | 3 | | Metroid Prime
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| 27. | Metroid Prime Part 7 Varia | 3 | | Metroid Prime
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| 28. | Metroid Prime Part 9 Boost | 3 | | Metroid Prime
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| 29. | Metroid Prime Part 2 Ruins | 3 | | Metroid Prime
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| 30. | Metroid Prime Part 28 Omega | 2 | | Metroid Prime
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| 31. | Metroid Prime Part 5 Impact | 1 | | Metroid Prime
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| 32. | Metroid Prime Part 32 End | 1 | | Metroid Prime
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