| 1. | Romancing SaGa 3 | 246,148 | 13.99% | 1 | 56:09 |
| 2. | Dragon Quest V: Hand of the Heavenly Bride | 123,407 | 7.02% | 2 | 53:12 |
| 3. | Fire Emblem: Mystery of the Emblem | 117,215 | 6.66% | 1 | 15:22 |
| 4. | Fire Emblem: Genealogy of the Holy War | 92,048 | 5.23% | 2 | 56:03 |
| 5. | Dragon Quest VI: Realms of Revelation | 88,919 | 5.06% | 2 | 1:10:01 |
| 6. | Treasure of the Rudras | 85,641 | 4.87% | 7 | 3:13:23 |
| 7. | Castlevania: Symphony of the Night | 65,395 | 3.72% | 2 | 1:28:30 |
| 8. | Devil Summoner: Soul Hackers | 55,600 | 3.16% | 5 | 3:01:01 |
| 9. | The Legend of Zelda: A Link to the Past | 52,081 | 2.96% | 1 | 14:44 |
| 10. | Fire Emblem: Thracia 776 | 51,730 | 2.94% | 1 | 24:17 |
| 11. | Egg Monster Hero | 49,999 | 2.84% | 1 | 25:20 |
| 12. | Fire Emblem: Shadow Dragon and the Blade of Light | 45,620 | 2.59% | 1 | 13:14 |
| 13. | Bahamut Lagoon | 43,218 | 2.46% | 1 | 14:59 |
| 14. | Final Fantasy Mystic Quest | 41,439 | 2.36% | 2 | 27:01 |
| 15. | Legend of Mana | 39,569 | 2.25% | 2 | 1:18:09 |
| 16. | Breath of Fire III | 38,990 | 2.22% | 3 | 1:20:27 |
| 17. | Chrono Trigger | 36,082 | 2.05% | 5 | 2:24:43 |
| 18. | Star Ocean | 34,460 | 1.96% | 1 | 22:17 |
| 19. | Hanjuku Eiyuu: Aa Sekai Yo Hanjuku Nare | 31,735 | 1.80% | 1 | 28:16 |
| 20. | Front Mission | 30,161 | 1.71% | 1 | 32:10 |
| 21. | Live A Live | 29,291 | 1.67% | 3 | 43:24 |
| 22. | Ogre Battle: The March of the Black Queen | 27,453 | 1.56% | 2 | 54:09 |
| 23. | Trials of Mana | 26,454 | 1.50% | 2 | 2:10:10 |
| 24. | Earthbound | 24,659 | 1.40% | 3 | 35:34 |
| 25. | Breath of Fire II | 23,557 | 1.34% | 3 | 44:21 |
| 26. | Breath of Fire | 23,199 | 1.32% | 7 | 1:40:05 |
| 27. | Secret of Mana | 21,483 | 1.22% | 2 | 1:56:00 |
| 28. | Star Ocean: The Second Story | 16,038 | 0.91% | 3 | 1:51:41 |
| 29. | Terranigma | 13,859 | 0.79% | 2 | 24:43 |
| 30. | Mega Man 7 | 13,350 | 0.76% | 2 | 29:28 |
| 31. | Tales of Phantasia | 12,824 | 0.73% | 3 | 44:12 |
| 32. | Lufia II: Rise of the Sinistrals | 12,444 | 0.71% | 2 | 1:20:58 |
| 33. | Romancing SaGa 2 | 9,327 | 0.53% | 4 | 47:25 |
| 34. | Xenogears | 7,018 | 0.40% | 4 | 4:17:27 |
| 35. | Ys III: Wanderers from Ys | 5,813 | 0.33% | 1 | 15:07 |
| 36. | Lufia: Curse of the Sinistrals | 5,401 | 0.31% | 1 | 29:18 |
| 37. | Valkyrie Profile | 4,939 | 0.28% | 3 | 1:43:05 |
| 38. | SaGa Frontier | 4,416 | 0.25% | 2 | 1:18:41 |
| 39. | Final Fantasy Legend II | 3,954 | 0.22% | 1 | 16:02 |
| 40. | Gran Turismo 2 | 3,541 | 0.20% | 5 | 49:09 |
| 41. | Super Ghouls 'n Ghosts | 3,079 | 0.18% | 1 | 14:25 |
| 42. | Tales of Eternia | 2,884 | 0.16% | 2 | 1:19:45 |
| 43. | Tales of Destiny | 2,708 | 0.15% | 1 | 47:54 |
| 44. | Final Fantasy V | 1,295 | 0.07% | 4 | 2:25:55 |
| 45. | Parasite Eve II | 1,106 | 0.06% | 1 | 41:39 |
| 46. | Mega Man | 846 | 0.05% | 1 | 59:46 |
