| 1. | The Legend of Zelda: A Link to the Past | 4,591,165 | 4.66% | 15 | 10:09:37 |
| 2. | Donkey Kong Country | 2,704,885 | 2.74% | 9 | 1:06:08 |
| 3. | Super Mario World | 2,509,208 | 2.55% | 9 | 2:09:17 |
| 4. | Super Mario RPG | 2,248,605 | 2.28% | 9 | 2:44:20 |
| 5. | Final Fantasy VI | 1,962,062 | 1.99% | 12 | 3:33:25 |
| 6. | Chrono Trigger | 1,073,937 | 1.09% | 17 | 12:16:27 |
| 7. | Super Metroid | 1,073,086 | 1.09% | 10 | 58:09 |
| 8. | Earthbound | 1,025,230 | 1.04% | 5 | 10:32:20 |
| 9. | Super Soccer | 993,599 | 1.01% | 2 | 27:06 |
| 10. | ActRaiser | 984,000 | 1.00% | 4 | 27:26 |
| 11. | Street Fighter II | 873,428 | 0.89% | 8 | 40:34 |
| 12. | Secret of Mana | 670,363 | 0.68% | 1 | 2:58:25 |
| 13. | Teenage Mutant Ninja Turtles IV: Turtles in Time | 653,069 | 0.66% | 2 | 9:56 |
| 14. | Thunder Force IV | 634,911 | 0.64% | 2 | 17:07 |
| 15. | Secret of Evermore | 633,243 | 0.64% | 4 | 1:05:30 |
| 16. | Mutant League Football | 624,355 | 0.63% | 2 | 10:53 |
| 17. | Venom/Spider-Man: Separation Anxiety | 599,656 | 0.61% | 1 | 12:50 |
| 18. | Mortal Kombat | 568,222 | 0.58% | 3 | 19:03 |
| 19. | Zero the Kamikaze Squirrel | 566,978 | 0.58% | 1 | 7:40 |
| 20. | Super Bomberman | 535,975 | 0.54% | 2 | 15:21 |
| 21. | The Amazing Spider-Man: Lethal Foes | 528,029 | 0.54% | 2 | 11:56 |
| 22. | Super Star Wars: The Empire Strikes Back | 488,531 | 0.50% | 2 | 18:46 |
| 23. | Contra III: The Alien Wars | 460,600 | 0.47% | 5 | 52:54 |
| 24. | The Twisted Tales of Spike McFang | 447,026 | 0.45% | 1 | 9:35 |
| 25. | Terminator 2: Judgment Day | 443,804 | 0.45% | 2 | 16:01 |
| 26. | Star Fox 2 | 413,574 | 0.42% | 3 | 20:25 |
| 27. | Alien Crush | 405,656 | 0.41% | 1 | 11:21 |
| 28. | Illusion of Gaia | 397,470 | 0.40% | 2 | 9:03 |
| 29. | X-Men: Mutant Apocalypse | 369,689 | 0.38% | 3 | 13:34 |
| 30. | Tales of Phantasia | 357,006 | 0.36% | 2 | 16:43 |
| 31. | Mortal Kombat II | 352,764 | 0.36% | 1 | 6:44 |
| 32. | Battletoads/Double Dragon | 351,053 | 0.36% | 2 | 11:53 |
| 33. | Tetris Attack | 348,314 | 0.35% | 2 | 9:56 |
| 34. | Super Mario Land 2: 6 Golden Coins | 346,225 | 0.35% | 2 | 12:55 |
| 35. | Road Runner's Death Valley Rally | 340,255 | 0.35% | 2 | 14:11 |
| 36. | Pro Wrestling | 329,080 | 0.33% | 1 | 10:45 |
| 37. | Elevator Action Returns | 326,718 | 0.33% | 1 | 6:47 |
| 38. | Mega Man X | 322,352 | 0.33% | 2 | 1:39:15 |
| 39. | Secret of Mana | 321,117 | 0.33% | 21 | 3:35:44 |
| 40. | Star Fox | 318,857 | 0.32% | 14 | 2:42:19 |
| 41. | Zelda II: The Adventure of Link | 317,292 | 0.32% | 2 | 15:38 |
| 42. | Ranger X | 308,136 | 0.31% | 2 | 11:41 |
| 43. | Final Fantasy Mystic Quest | 305,816 | 0.31% | 4 | 3:16:57 |
| 44. | The 7th Saga | 303,491 | 0.31% | 2 | 12:07 |
| 45. | Stunt Race FX | 299,426 | 0.30% | 2 | 14:40 |
| 46. | Donkey Kong Country 3 | 297,491 | 0.30% | 1 | 9:52 |
| 47. | Super Star Wars | 296,483 | 0.30% | 1 | 10:01 |
| 48. | The Guardian Legend | 292,405 | 0.30% | 3 | 22:10 |
| 49. | Super Mario World 2: Yoshi's Island | 278,523 | 0.28% | 3 | 20:09 |
| 50. | Super R-Type | 274,388 | 0.28% | 2 | 14:25 |
| 51. | Streets of Rage 3 | 259,298 | 0.26% | 1 | 0:00 |
| 52. | Terranigma | 258,758 | 0.26% | 2 | 11:38 |
| 53. | Brutal: Paws of Fury | 253,708 | 0.26% | 2 | 15:17 |
| 54. | Micro Machines 2: Turbo Tournament | 250,123 | 0.25% | 1 | 7:35 |
| 55. | F-Zero | 245,434 | 0.25% | 2 | 30:00 |
| 56. | Paperboy 2 | 241,997 | 0.25% | 2 | 10:04 |
| 57. | Ghoul Patrol | 237,937 | 0.24% | 2 | 15:01 |
| 58. | Ken Griffey Jr. Presents Major League Baseball | 236,103 | 0.24% | 4 | 33:39 |
| 59. | Wolverine: Adamantium Rage | 232,016 | 0.24% | 1 | 6:15 |
| 60. | NBA Jam T.E. | 230,519 | 0.23% | 1 | 8:00 |
| 61. | Chrono Cross | 223,154 | 0.23% | 1 | 7:11 |
| 62. | Liberty or Death | 221,437 | 0.22% | 1 | 6:45 |
| 63. | Metamoqester | 221,129 | 0.22% | 1 | 7:21 |
| 64. | Super Castlevania IV | 217,344 | 0.22% | 2 | 1:08:22 |
| 65. | Splatterhouse | 213,506 | 0.22% | 2 | 17:31 |
| 66. | Todd McFarlane's Spawn: The Video Game | 211,605 | 0.21% | 1 | 3:53 |
| 67. | Mario Bros. | 211,097 | 0.21% | 1 | 9:20 |
| 68. | Alien vs. Predator | 208,374 | 0.21% | 2 | 8:07 |
| 69. | Best of the Best: Championship Karate | 206,133 | 0.21% | 1 | 7:51 |
| 70. | Metal Warriors | 204,784 | 0.21% | 3 | 10:27 |
| 71. | Romancing SaGa | 204,600 | 0.21% | 1 | 9:21 |
| 72. | Ken Griffey Jr.'s Winning Run | 204,295 | 0.21% | 1 | 11:16 |
| 73. | Teenage Mutant Ninja Turtles: Tournament Fighters | 204,038 | 0.21% | 1 | 3:24 |
| 74. | Road Rash 64 | 203,518 | 0.21% | 2 | 11:05:04 |
| 75. | The Simpsons: Bart's Nightmare | 201,654 | 0.20% | 1 | 4:17 |
| 76. | Energy Breaker | 200,636 | 0.20% | 2 | 14:25 |
| 77. | Shining Force CD | 200,378 | 0.20% | 1 | 11:00 |
| 78. | Biker Mice from Mars | 200,201 | 0.20% | 1 | 4:43 |
| 79. | Mutant League Hockey | 198,579 | 0.20% | 1 | 8:50 |
| 80. | Breath of Fire II | 198,298 | 0.20% | 1 | 4:59 |
| 81. | Kid Chameleon | 197,384 | 0.20% | 1 | 6:35 |
| 82. | X-Men 2: Clone Wars | 197,339 | 0.20% | 1 | 3:51 |
| 83. | Final Fight 3 | 196,800 | 0.20% | 2 | 44:52 |
| 84. | Lufia & the Fortress of Doom | 193,753 | 0.20% | 1 | 5:31 |
| 85. | Virtual Boy Wario Land | 190,635 | 0.19% | 1 | 10:01 |
| 86. | World of Illusion | 190,316 | 0.19% | 1 | 17:35 |
| 87. | Streets of Rage 4 | 189,513 | 0.19% | 1 | 10:40 |
| 88. | The Lawnmower Man | 187,305 | 0.19% | 1 | 5:40 |
| 89. | The Death and Return of Superman | 186,061 | 0.19% | 1 | 3:22 |
| 90. | Dragon Ball Z: Super Saiya Densetsu | 185,821 | 0.19% | 1 | 8:00 |
| 91. | NAM-1975 | 185,787 | 0.19% | 1 | 9:22 |
| 92. | Knights of the Round | 184,379 | 0.19% | 2 | 7:57 |
| 93. | Yoshi's Island | 182,085 | 0.18% | 1 | 7:45 |
| 94. | Cybernator | 179,162 | 0.18% | 2 | 10:03 |
| 95. | Super Ghouls 'n Ghosts | 177,319 | 0.18% | 3 | 1:05:45 |
| 96. | Super Punch-Out!! | 177,318 | 0.18% | 2 | 11:51 |
| 97. | Primal Rage | 176,823 | 0.18% | 1 | 5:50 |
| 98. | Trials of Mana | 176,182 | 0.18% | 1 | 9:13 |
| 99. | Golden Axe Warrior | 176,127 | 0.18% | 1 | 9:31 |
| 100. | Wayne's World | 175,808 | 0.18% | 1 | 9:00 |
