| 1. | Super Paper Mario | 2,266,091 | 31.47% | 114 | 16:17:36 |
| 2. | Super Mario Galaxy | 1,193,209 | 16.57% | 131 | 13:17:36 |
| 3. | Super Mario Advance 4: Super Mario Bros. 3 | 569,585 | 7.91% | 27 | 8:16:36 |
| 4. | Crash Bandicoot: The Wrath of Cortex | 533,174 | 7.40% | 88 | 7:09:40 |
| 5. | Final Fantasy XII | 397,008 | 5.51% | 342 | 2:02:13:43 |
| 6. | Trauma Center: New Blood | 258,396 | 3.59% | 69 | 8:45:35 |
| 7. | Super Mario Galaxy 2 | 197,193 | 2.74% | 284 | 1:04:47:50 |
| 8. | Trauma Team | 149,766 | 2.08% | 155 | 1:00:38:51 |
| 9. | Shin Megami Tensei III: Nocturne | 120,834 | 1.68% | 16 | 1:27:54 |
| 10. | Metroid Prime 2: Echoes | 119,375 | 1.66% | 97 | 15:13:01 |
| 11. | Secret of Evermore | 112,536 | 1.56% | 27 | 2:20:33 |
| 12. | Metroid Prime | 98,730 | 1.37% | 64 | 9:49:20 |
| 13. | Donkey Kong Country 3 | 88,592 | 1.23% | 64 | 1:11:15:41 |
| 14. | Secret of Mana | 82,049 | 1.14% | 56 | 6:18:11 |
| 15. | Jazz Jackrabbit | 76,061 | 1.06% | 48 | 4:26:31 |
| 16. | StepMania | 71,398 | 0.99% | 113 | 6:17:57 |
| 17. | Donkey Kong Country 2 | 65,712 | 0.91% | 67 | 12:06:08 |
| 18. | Metroid: Zero Mission | 60,939 | 0.85% | 55 | 8:04:46 |
| 19. | Pokémon Gold and Silver | 56,077 | 0.78% | 28 | 2:18:59 |
| 20. | Tetris | 52,270 | 0.73% | 15 | 1:51:47 |
| 21. | Pokémon Stadium 2 | 40,848 | 0.57% | 9 | 1:24:56 |
| 22. | Far Away | 37,778 | 0.52% | 1 | 9:50 |
| 23. | Mole Mania | 37,614 | 0.52% | 53 | 5:54:19 |
| 24. | Earthbound | 37,082 | 0.51% | 54 | 9:50:01 |
| 25. | Super Mario Odyssey | 24,831 | 0.34% | 2 | 9:39 |
| 26. | Wario Land 4 | 24,395 | 0.34% | 68 | 12:57:11 |
| 27. | Dr. Mario | 24,272 | 0.34% | 8 | 49:09 |
| 28. | Beatmania IIDX | 23,177 | 0.32% | 61 | 2:38:00 |
| 29. | Metroid Prime 3: Corruption | 13,477 | 0.19% | 48 | 17:09:23 |
| 30. | The Legend of Zelda | 13,371 | 0.19% | 20 | 22:48:55 |
| 31. | Wario Land: Super Mario Land 3 | 10,376 | 0.14% | 14 | 3:35:54 |
| 32. | Dance Dance Revolution SuperNOVA | 9,070 | 0.13% | 21 | 47:54 |
| 33. | Gyromancer | 8,911 | 0.12% | 5 | 38:02 |
| 34. | Gun.Smoke | 8,303 | 0.12% | 8 | 40:58 |
| 35. | In the Groove 2 | 8,227 | 0.11% | 19 | 54:46 |
| 36. | Tenhou | 7,973 | 0.11% | 3 | 3:30 |
| 37. | The Legend of Dragoon | 7,554 | 0.10% | 91 | 1:04:47:34 |
| 38. | Trauma Center: Second Opinion | 7,100 | 0.10% | 7 | 40:58 |
| 39. | Puss 'n Boots: Pero's Great Adventure | 6,311 | 0.09% | 7 | 16:40 |
| 40. | Yu-Gi-Oh! Master Duel | 6,093 | 0.08% | 31 | 22:00:14 |
| 41. | F-Zero GX | 5,952 | 0.08% | 21 | 1:10:33 |
| 42. | Kirby's Dream Land 3 | 5,308 | 0.07% | 3 | 26:53 |
| 43. | Super Smash Bros. Ultimate | 5,103 | 0.07% | 1 | 5:39 |
| 44. | Wario Land 3 | 4,933 | 0.07% | 29 | 8:50:21 |
| 45. | Castlevania: Order of Ecclesia | 4,741 | 0.07% | 1 | 0:21 |
| 46. | I Wanna Be the Guy | 4,456 | 0.06% | 10 | 1:31:48 |
| 47. | Guitar Hero III: Legends of Rock | 4,400 | 0.06% | 5 | 24:03 |
| 48. | The Legend of Zelda: A Link to the Past | 4,301 | 0.06% | 15 | 1:08:09:15 |
| 49. | Wario World | 4,115 | 0.06% | 20 | 5:58:42 |
| 50. | Wario Land II | 4,094 | 0.06% | 26 | 7:12:23 |
| 51. | Final Fantasy | 3,977 | 0.06% | 30 | 5:40:57 |
| 52. | Dance Dance Revolution SuperNOVA 2 | 3,870 | 0.05% | 3 | 18:19 |
| 53. | Donkey Kong Country | 3,549 | 0.05% | 15 | 6:07:57 |
| 54. | Tetris: The Grand Master | 3,469 | 0.05% | 6 | 1:06:32 |
| 55. | Waialae Country Club: True Golf Classics | 3,189 | 0.04% | 3 | 58:49 |
| 56. | Donkey Kong Land 2 | 3,131 | 0.04% | 10 | 3:25:32 |
| 57. | The King of Dragons | 3,102 | 0.04% | 6 | 33:15 |
| 58. | Donkey Kong Land III | 2,978 | 0.04% | 12 | 3:09:39 |
| 59. | Guitar Hero | 2,901 | 0.04% | 4 | 20:33 |
| 60. | osu! | 2,817 | 0.04% | 7 | 13:33 |
| 61. | Super Mario 64 | 2,440 | 0.03% | 8 | 5:14:36 |
| 62. | Dance Dance Revolution X | 2,416 | 0.03% | 1 | 2:23 |
| 63. | Donkey Kong Land | 2,243 | 0.03% | 9 | 2:04:36 |
| 64. | Bravely Default | 1,901 | 0.03% | 19 | 8:53:06 |
| 65. | Metroid Fusion | 1,731 | 0.02% | 8 | 4:28:54 |
| 66. | Donkey Kong 64 | 1,692 | 0.02% | 5 | 6:28 |
| 67. | Pokémon HeartGold and SoulSilver | 1,652 | 0.02% | 1 | 8:36 |
| 68. | Banjo-Kazooie | 1,571 | 0.02% | 3 | 10:19 |
| 69. | Guitar Hero II | 1,505 | 0.02% | 7 | 43:06 |
| 70. | Trauma Center: Under the Knife 2 | 1,491 | 0.02% | 4 | 27:37 |
| 71. | Pokémon Puzzle League | 1,294 | 0.02% | 3 | 18:20 |
| 72. | Beatmania IIDX 13: Distorted | 1,170 | 0.02% | 2 | 4:21 |
| 73. | Beatmania IIDX 15: DJ Troopers | 1,117 | 0.02% | 3 | 6:58 |
| 74. | Terranigma | 1,061 | 0.01% | 1 | 8:16 |
| 75. | Castle Crush | 984 | 0.01% | 1 | 6:07 |
| 76. | Final Fantasy VIII | 849 | 0.01% | 1 | 4:01 |
| 77. | Pokémon Colosseum | 846 | 0.01% | 7 | 2:05:15 |
| 78. | The Pinball Arcade | 814 | 0.01% | 2 | 1:08:29 |
| 79. | Ninja Gaiden | 814 | 0.01% | 2 | 11:44 |
| 80. | Mario Golf | 801 | 0.01% | 1 | 0:45 |
| 81. | Epic Pinball | 644 | 0.01% | 2 | 7:50 |
| 82. | Super Mario Bros. 2 | 602 | 0.01% | 2 | 2:05:43 |
| 83. | Icarus | 601 | 0.01% | 1 | 2:20 |
| 84. | Super Mario World 2: Yoshi's Island | 601 | 0.01% | 1 | 0:28 |
| 85. | Super Mario Bros. | 569 | 0.01% | 2 | 51:22 |
| 86. | Dance Dance Revolution Extreme | 523 | 0.01% | 1 | 2:32 |
| 87. | Super Metroid | 520 | 0.01% | 7 | 16:44:21 |
| 88. | Dance Dance Revolution X3 vs. 2ndMix | 519 | 0.01% | 3 | 7:23 |
| 89. | Pokémon Puzzle Challenge | 506 | 0.01% | 2 | 28:06 |
| 90. | PUSS! | 500 | 0.01% | 1 | 4:21 |
| 91. | Final Fantasy VI | 499 | 0.01% | 5 | 35:48 |
| 92. | Super Pinball: Behind the Mask | 466 | 0.01% | 1 | 27:43 |
| 93. | The Seven Deadly Sins: Grand Cross | 459 | 0.01% | 1 | 5:45 |
| 94. | Super Mario Bros.: The Lost Levels | 435 | 0.01% | 3 | 2:27:15 |
| 95. | Super Mario Bros. 3 | 394 | 0.01% | 2 | 2:44:19 |
| 96. | Yu-Gi-Oh! Online | 386 | 0.01% | 3 | 2:29:16 |
| 97. | Donkey Kong '94 | 386 | 0.01% | 1 | 1:50:27 |
| 98. | DDRMAX Dance Dance Revolution 6thMix | 338 | 0.00% | 1 | 1:50 |
| 99. | Final Fantasy V | 313 | 0.00% | 4 | 50:23 |
| 100. | Beatmania IIDX 11: IIDXRED | 302 | 0.00% | 1 | 2:35 |
