| 1. | Minecraft | 404,556 | 8.42% | 120 | 1:00:15:29 |
| 2. | I Wanna Be the Guy | 214,806 | 4.47% | 85 | 14:46:49 |
| 3. | DuckTales | 156,368 | 3.25% | 9 | 44:26 |
| 4. | Dragon Quest III: The Seeds of Salvation | 149,972 | 3.12% | 59 | 9:16:42 |
| 5. | Zelda II: The Adventure of Link | 144,498 | 3.01% | 24 | 3:21:19 |
| 6. | Fire Emblem: The Sacred Stones | 138,744 | 2.89% | 91 | 2:06:55:00 |
| 7. | Earthbound | 137,314 | 2.86% | 59 | 9:54:03 |
| 8. | Civilization II | 117,797 | 2.45% | 43 | 7:39:32 |
| 9. | Pokémon Red and Blue | 95,347 | 1.98% | 39 | 6:32:41 |
| 10. | The Legend of Zelda | 86,107 | 1.79% | 31 | 4:35:13 |
| 11. | Abobo's Big Adventure | 84,949 | 1.77% | 10 | 1:43:35 |
| 12. | Streets of Rage Remake | 74,225 | 1.54% | 44 | 7:39:05 |
| 13. | Fire Emblem: The Binding Blade | 61,849 | 1.29% | 113 | 2:14:57:15 |
| 14. | Donkey Kong Country 3 | 59,621 | 1.24% | 26 | 4:15:34 |
| 15. | Punch-Out!! | 57,754 | 1.20% | 2 | 2:24 |
| 16. | Final Fantasy | 57,329 | 1.19% | 41 | 9:15:36 |
| 17. | Spider-Man and Venom: Maximum Carnage | 56,509 | 1.18% | 12 | 1:22:49 |
| 18. | Donkey Kong Country 2 | 54,471 | 1.13% | 23 | 3:36:50 |
| 19. | Super Mario World 2: Yoshi's Island | 46,258 | 0.96% | 26 | 7:58:06 |
| 20. | StarTropics | 45,023 | 0.94% | 22 | 2:50:46 |
| 21. | Super Mario Bros. 2 | 40,462 | 0.84% | 13 | 1:50:32 |
| 22. | Lock's Quest | 39,234 | 0.82% | 32 | 10:37:17 |
| 23. | Soul Blazer | 38,934 | 0.81% | 30 | 5:00:28 |
| 24. | Bubble Bobble | 38,039 | 0.79% | 23 | 3:03:11 |
| 25. | Fire Emblem: Path of Radiance | 37,590 | 0.78% | 44 | 1:02:52:39 |
| 26. | Smash TV | 36,648 | 0.76% | 39 | 14:17:39 |
| 27. | Castlevania II: Simon's Quest | 36,600 | 0.76% | 16 | 1:48:34 |
| 28. | Mega Man 2 | 35,183 | 0.73% | 16 | 1:03:18 |
| 29. | Legend of the River King | 34,530 | 0.72% | 9 | 2:09:25 |
| 30. | Kickle Cubicle | 33,527 | 0.70% | 18 | 2:47:13 |
| 31. | Shadowgate | 32,584 | 0.68% | 11 | 1:44:27 |
| 32. | Donkey Kong Country | 32,528 | 0.68% | 14 | 1:59:30 |
| 33. | Circus Charlie | 32,256 | 0.67% | 1 | 7:14 |
| 34. | Super Mario RPG | 29,386 | 0.61% | 39 | 10:31:42 |
| 35. | Dragon Quest II: Luminaries of the Legendary Line | 28,660 | 0.60% | 18 | 4:19:15 |
| 36. | Dragon Quest IV: Chapters of the Chosen | 28,348 | 0.59% | 51 | 15:12:08 |
| 37. | Legend of the River King 2 | 27,419 | 0.57% | 13 | 3:14:57 |
| 38. | New Super Mario Bros. Wii | 26,897 | 0.56% | 16 | 5:01:46 |
| 39. | Dragon Quest V: Hand of the Heavenly Bride | 26,447 | 0.55% | 52 | 18:16:23 |
| 40. | Super Mario Bros. 3 | 26,304 | 0.55% | 13 | 2:55:16 |
| 41. | River City Ransom EX | 25,758 | 0.54% | 6 | 1:46:35 |
| 42. | Metal Gear | 25,542 | 0.53% | 11 | 1:40:30 |
| 43. | Kirby's Adventure | 24,351 | 0.51% | 13 | 1:51:35 |
| 44. | Super Mario Bros. | 23,733 | 0.49% | 17 | 1:46:48 |
| 45. | Battalion Wars | 22,686 | 0.47% | 25 | 5:24:09 |
| 46. | Super Mario World | 22,308 | 0.46% | 19 | 3:44:33 |
| 47. | Double Dragon Advance | 22,189 | 0.46% | 9 | 1:06:32 |
| 48. | Scribblenauts Unlimited | 22,185 | 0.46% | 5 | 1:06:44 |
| 49. | Parasol Stars | 21,078 | 0.44% | 11 | 1:02:15 |
| 50. | Lemmings | 20,906 | 0.43% | 37 | 11:41:02 |
| 51. | Bokosuka Wars | 20,723 | 0.43% | 5 | 36:59 |
| 52. | Zombies Ate My Neighbors | 19,671 | 0.41% | 12 | 3:15:23 |
| 53. | Pitfall: The Lost Expedition | 19,558 | 0.41% | 19 | 6:44:16 |
| 54. | The Simpsons: Bart vs. the Space Mutants | 19,155 | 0.40% | 7 | 1:01:09 |
| 55. | Tetris | 19,076 | 0.40% | 1 | 8:54 |
| 56. | The Legend of Zelda: A Link to the Past | 18,920 | 0.39% | 19 | 5:44:41 |
| 57. | Super Punch-Out!! | 18,898 | 0.39% | 6 | 48:13 |
| 58. | FTL: Faster Than Light | 18,035 | 0.38% | 38 | 11:23:09 |
| 59. | Mario Bros. | 17,527 | 0.36% | 9 | 51:19 |
| 60. | California Games | 16,948 | 0.35% | 6 | 26:38 |
| 61. | Dragon Quest | 16,881 | 0.35% | 9 | 1:42:50 |
| 62. | The Simpsons: Bart vs. The Juggernauts | 16,104 | 0.34% | 5 | 34:14 |
| 63. | Mario Golf: Toadstool Tour | 15,698 | 0.33% | 11 | 2:32:06 |
| 64. | Super Pitfall | 15,688 | 0.33% | 8 | 1:01:48 |
| 65. | Secret of Evermore | 15,146 | 0.32% | 33 | 10:33:13 |
| 66. | Xexyz | 15,069 | 0.31% | 10 | 1:23:55 |
| 67. | Mario & Luigi: Superstar Saga | 14,466 | 0.30% | 20 | 8:16:56 |
| 68. | Faxanadu | 14,201 | 0.30% | 8 | 1:52:30 |
| 69. | Undertale | 14,052 | 0.29% | 24 | 9:01:19 |
| 70. | Snow Bros. | 13,816 | 0.29% | 7 | 42:22 |
| 71. | Crystalis | 13,789 | 0.29% | 22 | 4:45:42 |
| 72. | Super Bomberman | 13,612 | 0.28% | 9 | 1:13:28 |
| 73. | The NewZealand Story | 12,787 | 0.27% | 7 | 48:38 |
| 74. | Teenage Mutant Ninja Turtles: Turtles in Time | 12,370 | 0.26% | 7 | 1:02:33 |
| 75. | Banjo-Kazooie | 11,592 | 0.24% | 23 | 7:36:32 |
| 76. | Final Fantasy II | 11,482 | 0.24% | 28 | 8:41:26 |
| 77. | Sweet Home | 11,440 | 0.24% | 8 | 1:57:26 |
| 78. | Binary Land | 11,070 | 0.23% | 1 | 7:30 |
| 79. | Road Fighter | 10,859 | 0.23% | 1 | 7:22 |
| 80. | Mappy | 10,765 | 0.22% | 1 | 5:58 |
| 81. | Pooyan | 10,738 | 0.22% | 1 | 9:50 |
| 82. | Spelunky | 10,689 | 0.22% | 19 | 6:34:34 |
| 83. | Portal 2 | 10,562 | 0.22% | 22 | 5:47:13 |
| 84. | DuckTales: Remastered | 10,493 | 0.22% | 14 | 3:27:18 |
| 85. | Mystery Quest | 10,306 | 0.21% | 5 | 40:37 |
| 86. | City Connection | 10,218 | 0.21% | 1 | 10:50 |
| 87. | Shantae | 10,123 | 0.21% | 17 | 4:43:27 |
| 88. | Antarctic Adventure | 10,045 | 0.21% | 1 | 9:27 |
| 89. | Ghost Lion | 9,808 | 0.20% | 12 | 2:58:01 |
| 90. | The Legend of Zelda: Link's Awakening | 9,766 | 0.20% | 21 | 5:50:29 |
| 91. | Illusion of Gaia | 9,709 | 0.20% | 26 | 9:17:35 |
| 92. | Mickey Mousecapade | 9,101 | 0.19% | 4 | 23:05 |
| 93. | Battle City | 9,012 | 0.19% | 1 | 8:17 |
| 94. | VVVVVV | 8,981 | 0.19% | 11 | 2:28:06 |
| 95. | Super Contra | 8,961 | 0.19% | 5 | 24:12 |
| 96. | Metal Gear Solid | 8,571 | 0.18% | 18 | 9:02:26 |
| 97. | Paperboy 2 | 8,526 | 0.18% | 7 | 1:27:02 |
| 98. | The Adventures of Tom Sawyer | 8,401 | 0.17% | 4 | 12:11 |
| 99. | NES Open Tournament Golf | 8,058 | 0.17% | 13 | 3:01:22 |
| 100. | Super Mario Land 2: 6 Golden Coins | 8,039 | 0.17% | 10 | 2:04:40 |
