| 1. | Wild Arms | 105,644 | 4.99% | 5 | 10:53 |
| 2. | Shadow Hearts: Covenant | 42,431 | 2.00% | 6 | 24:25 |
| 3. | Castlevania: Curse of Darkness | 38,049 | 1.80% | 5 | 22:49 |
| 4. | Donkey Kong Country 2 | 32,359 | 1.53% | 5 | 20:32 |
| 5. | Shadow Hearts: From the New World | 30,121 | 1.42% | 6 | 17:41 |
| 6. | The Legend of Zelda: Ocarina of Time | 29,543 | 1.40% | 4 | 6:54 |
| 7. | Wild Arms 4 | 29,246 | 1.38% | 6 | 23:05 |
| 8. | Wild Arms 3 | 29,194 | 1.38% | 3 | 10:03 |
| 9. | Grandia II | 28,072 | 1.33% | 4 | 13:11 |
| 10. | Suikoden II | 23,960 | 1.13% | 3 | 11:41 |
| 11. | Metroid Prime | 23,015 | 1.09% | 1 | 4:25 |
| 12. | Xenosaga Episode III | 22,385 | 1.06% | 3 | 10:50 |
| 13. | Donkey Kong Country 3 | 21,803 | 1.03% | 5 | 19:19 |
| 14. | Beyond Good & Evil | 21,302 | 1.01% | 3 | 7:32 |
| 15. | Baten Kaitos: Eternal Wings and the Lost Ocean | 21,077 | 1.00% | 4 | 9:56 |
| 16. | Xenosaga Episode II | 18,737 | 0.89% | 4 | 14:11 |
| 17. | Skies of Arcadia | 18,544 | 0.88% | 4 | 10:07 |
| 18. | Legaia 2: Duel Saga | 17,862 | 0.84% | 3 | 11:23 |
| 19. | Breath of Fire: Dragon Quarter | 17,683 | 0.84% | 2 | 9:32 |
| 20. | Donkey Kong Country | 17,585 | 0.83% | 3 | 12:12 |
| 21. | The Legend of Zelda: The Wind Waker | 17,252 | 0.81% | 3 | 5:35 |
| 22. | Silent Hill 2 | 17,103 | 0.81% | 1 | 3:23 |
| 23. | Suikoden III | 16,569 | 0.78% | 3 | 9:13 |
| 24. | Lost Odyssey | 16,512 | 0.78% | 4 | 11:30 |
| 25. | Super Mario 64 | 16,382 | 0.77% | 3 | 9:08 |
| 26. | Deus Ex | 16,046 | 0.76% | 1 | 4:14 |
| 27. | Tales of Symphonia | 15,198 | 0.72% | 3 | 7:50 |
| 28. | Castlevania: Portrait of Ruin | 14,629 | 0.69% | 3 | 9:30 |
| 29. | Star Ocean: Till the End of Time | 13,601 | 0.64% | 2 | 4:26 |
| 30. | The Legend of Zelda: A Link to the Past | 13,423 | 0.63% | 3 | 8:01 |
| 31. | Super Mario Galaxy | 13,106 | 0.62% | 4 | 11:30 |
| 32. | Breath of Fire III | 12,942 | 0.61% | 4 | 10:53 |
| 33. | Phoenix Wright: Ace Attorney | 12,641 | 0.60% | 2 | 4:30 |
| 34. | Mario Kart 64 | 12,595 | 0.59% | 3 | 10:10 |
| 35. | Soul Edge | 12,518 | 0.59% | 2 | 8:48 |
| 36. | Eternal Sonata | 12,427 | 0.59% | 1 | 3:26 |
| 37. | Unreal Tournament 2003 | 12,190 | 0.58% | 2 | 9:11 |
| 38. | Chibi-Robo! | 11,929 | 0.56% | 1 | 1:29 |
| 39. | Alundra | 11,911 | 0.56% | 2 | 5:39 |
| 40. | Katamari Damacy | 11,567 | 0.55% | 3 | 17:36 |
| 41. | Tales of Legendia | 11,100 | 0.52% | 2 | 7:11 |
| 42. | The 7th Saga | 10,864 | 0.51% | 1 | 1:49 |
| 43. | Blue Dragon | 10,792 | 0.51% | 3 | 13:10 |
| 44. | Paper Mario: The Thousand-Year Door | 10,542 | 0.50% | 2 | 5:13 |
| 45. | Mega Man 2 | 10,038 | 0.47% | 2 | 3:45 |
| 46. | Star Ocean: The Second Story | 10,038 | 0.47% | 3 | 9:12 |
| 47. | Journey to Silius | 9,851 | 0.47% | 3 | 8:34 |
| 48. | Castlevania: Lament of Innocence | 9,688 | 0.46% | 2 | 9:02 |
| 49. | Pilotwings 64 | 9,150 | 0.43% | 2 | 6:15 |
| 50. | The Legend of Zelda: Twilight Princess | 9,058 | 0.43% | 2 | 5:45 |
| 51. | Metroid Fusion | 8,942 | 0.42% | 1 | 2:52 |
| 52. | Castlevania: Dawn of Sorrow | 8,933 | 0.42% | 2 | 4:58 |
| 53. | Pokémon Mystery Dungeon: Blue Rescue Team and Red Rescue Team | 8,853 | 0.42% | 1 | 7:17 |
| 54. | Wild Arms 5 | 8,823 | 0.42% | 2 | 9:08 |
| 55. | Mega Man 3 | 8,685 | 0.41% | 3 | 5:46 |
| 56. | Terranigma | 8,662 | 0.41% | 2 | 3:40 |
| 57. | Deep Labyrinth | 8,484 | 0.40% | 2 | 5:38 |
| 58. | Super Castlevania IV | 8,443 | 0.40% | 3 | 10:40 |
| 59. | Soma Bringer | 8,405 | 0.40% | 2 | 6:54 |
| 60. | DuckTales | 8,218 | 0.39% | 1 | 1:36 |
| 61. | Animal Crossing: Wild World | 8,210 | 0.39% | 1 | 5:05 |
| 62. | Mother 3 | 8,086 | 0.38% | 4 | 14:41 |
| 63. | Ōkami | 8,048 | 0.38% | 3 | 15:13 |
| 64. | Ragnarok Online 2: Legend of the Second | 7,951 | 0.38% | 2 | 8:37 |
| 65. | Dark Cloud | 7,863 | 0.37% | 2 | 3:37 |
| 66. | The Elder Scrolls IV: Oblivion | 7,455 | 0.35% | 1 | 3:31 |
| 67. | Dragon Ball Z | 7,281 | 0.34% | 2 | 5:19 |
| 68. | Castlevania: Symphony of the Night | 7,272 | 0.34% | 2 | 4:34 |
| 69. | Breath of Fire II | 7,205 | 0.34% | 2 | 4:17 |
| 70. | Breath of Fire | 7,170 | 0.34% | 2 | 3:40 |
| 71. | Super Metroid | 7,086 | 0.33% | 2 | 4:54 |
| 72. | Sonic the Hedgehog 3 | 7,077 | 0.33% | 3 | 7:09 |
| 73. | Mario & Luigi: Superstar Saga | 7,018 | 0.33% | 1 | 1:46 |
| 74. | Shadow Hearts | 6,899 | 0.33% | 2 | 4:06 |
| 75. | Mega Turrican | 6,760 | 0.32% | 1 | 6:18 |
| 76. | Tales of Eternia | 6,665 | 0.31% | 1 | 2:15 |
| 77. | Sonic Unleashed | 6,581 | 0.31% | 2 | 11:07 |
| 78. | Lunar: The Silver Star | 6,558 | 0.31% | 1 | 1:19 |
| 79. | Arc the Lad | 6,519 | 0.31% | 2 | 4:48 |
| 80. | Super Mario RPG | 6,498 | 0.31% | 2 | 3:26 |
| 81. | Mass Destruction | 6,065 | 0.29% | 1 | 3:29 |
| 82. | Wild Arms Alter Code: F | 5,988 | 0.28% | 1 | 3:14 |
| 83. | Castlevania II: Simon's Quest | 5,872 | 0.28% | 2 | 2:22 |
| 84. | Wild Arms 2 | 5,806 | 0.27% | 1 | 2:11 |
| 85. | Atelier Iris 3: Grand Phantasm | 5,571 | 0.26% | 2 | 7:25 |
| 86. | Super Mario World | 5,543 | 0.26% | 2 | 6:22 |
| 87. | Banjo-Kazooie | 5,536 | 0.26% | 2 | 8:39 |
| 88. | Golden Sun | 5,491 | 0.26% | 1 | 2:44 |
| 89. | Castlevania: Dracula X | 5,428 | 0.26% | 2 | 6:06 |
| 90. | Super Street Fighter II | 5,422 | 0.26% | 2 | 5:02 |
| 91. | Demon's Crest | 5,404 | 0.26% | 2 | 5:08 |
| 92. | Streets of Rage 2 | 5,382 | 0.25% | 2 | 5:46 |
| 93. | Silent Hill 3 | 5,339 | 0.25% | 2 | 9:10 |
| 94. | World of WarCraft | 5,319 | 0.25% | 2 | 9:07 |
| 95. | Breath of Fire IV | 5,198 | 0.25% | 2 | 5:16 |
| 96. | Etrian Odyssey II | 5,077 | 0.24% | 1 | 5:34 |
| 97. | Mega Man ZX Advent | 5,067 | 0.24% | 1 | 2:23 |
| 98. | Super Paper Mario | 4,989 | 0.24% | 2 | 5:27 |
| 99. | Pokémon Ruby and Sapphire | 4,870 | 0.23% | 2 | 4:06 |
| 100. | Pokémon Trading Card Game | 4,860 | 0.23% | 1 | 3:46 |
