| 1. | Mega Man | 2,970 | 5.77% | 142 | 21:09:29 |
| 2. | Mega Man 3 | 2,323 | 4.52% | 78 | 5:17:45 |
| 3. | Mega Man 2 | 1,468 | 2.85% | 77 | 7:00:15 |
| 4. | Dragon Ball Z: The Legacy of Goku II | 1,337 | 2.60% | 14 | 0:00 |
| 5. | Sly 3: Honor Among Thieves | 1,280 | 2.49% | 20 | 0:00 |
| 6. | Mega Man 5 | 1,214 | 2.36% | 68 | 8:38:07 |
| 7. | Sly 2: Band of Thieves | 1,138 | 2.21% | 27 | 0:00 |
| 8. | Shining Force | 1,077 | 2.09% | 30 | 4:57:51 |
| 9. | Vampire Hunter D | 946 | 1.84% | 6 | 0:00 |
| 10. | Treasure of the Rudras | 927 | 1.80% | 51 | 0:00 |
| 11. | Zoids: Legacy | 836 | 1.63% | 35 | 0:00 |
| 12. | Silent Storm | 806 | 1.57% | 51 | 0:00 |
| 13. | Dragon Ball: Advanced Adventure | 800 | 1.56% | 5 | 0:00 |
| 14. | Paper Mario | 789 | 1.53% | 21 | 10:43:02 |
| 15. | Dragon Ball Z: Buu's Fury | 733 | 1.43% | 10 | 0:00 |
| 16. | Mega Man 4 | 645 | 1.25% | 33 | 6:21:43 |
| 17. | Mega Man Legends 2 | 622 | 1.21% | 25 | 12:08:14 |
| 18. | Kirby & the Amazing Mirror | 619 | 1.20% | 5 | 0:00 |
| 19. | The Granstream Saga | 585 | 1.14% | 27 | 0:00 |
| 20. | The Legend of Zelda: A Link to the Past | 553 | 1.08% | 10 | 0:00 |
| 21. | Pokémon Mystery Dungeon: Blue Rescue Team and Red Rescue Team | 548 | 1.07% | 18 | 0:00 |
| 22. | Thousand Arms | 513 | 1.00% | 35 | 0:00 |
| 23. | Mario's Super Picross | 507 | 0.99% | 15 | 0:00 |
| 24. | Dragon Ball Z: The Legacy of Goku | 478 | 0.93% | 6 | 0:00 |
| 25. | Castlevania: Symphony of the Night | 462 | 0.90% | 12 | 0:00 |
| 26. | LSD: Dream Emulator | 453 | 0.88% | 9 | 0:00 |
| 27. | Super Mario Advance 4: Super Mario Bros. 3 | 432 | 0.84% | 4 | 0:00 |
| 28. | Mega Man Legends | 425 | 0.83% | 19 | 9:12:48 |
| 29. | Super Mario Bros. 2 | 371 | 0.72% | 7 | 1:43:14 |
| 30. | Super Bomberman | 364 | 0.71% | 6 | 44:05 |
| 31. | Sonic the Hedgehog 2 | 360 | 0.70% | 7 | 1:39:48 |
| 32. | Sword of Mana | 354 | 0.69% | 28 | 0:00 |
| 33. | Castlevania: Aria of Sorrow | 350 | 0.68% | 8 | 0:00 |
| 34. | Illusion of Gaia | 342 | 0.66% | 21 | 22:33 |
| 35. | Dark Castle | 331 | 0.64% | 20 | 1:39:26 |
| 36. | Super Mario World 2: Yoshi's Island | 330 | 0.64% | 14 | 0:00 |
| 37. | Zelda II: The Adventure of Link | 305 | 0.59% | 6 | 0:00 |
| 38. | Omega Boost | 302 | 0.59% | 2 | 0:00 |
| 39. | Road Rash II | 291 | 0.57% | 6 | 0:00 |
| 40. | MediEvil | 291 | 0.57% | 11 | 1:24:25 |
| 41. | Front Mission Series: Gun Hazard | 290 | 0.56% | 15 | 11:30:58 |
| 42. | Super Punch-Out!! | 289 | 0.56% | 4 | 44:18 |
| 43. | Metroid: Zero Mission | 275 | 0.53% | 7 | 3:32:46 |
| 44. | Crusader of Centy | 271 | 0.53% | 10 | 4:39:24 |
| 45. | Punch-Out!! | 269 | 0.52% | 4 | 44:19 |
| 46. | Threads of Fate | 262 | 0.51% | 15 | 8:47:11 |
| 47. | Super Mario RPG | 256 | 0.50% | 13 | 9:55:55 |
| 48. | Castlevania: Circle of the Moon | 234 | 0.45% | 10 | 0:00 |
| 49. | Dark Cloud | 231 | 0.45% | 12 | 0:00 |
| 50. | E.V.O.: Search for Eden | 231 | 0.45% | 5 | 3:04:36 |
| 51. | Sly Cooper and the Thievius Raccoonus | 226 | 0.44% | 9 | 0:00 |
| 52. | Sweet Home | 225 | 0.44% | 12 | 0:00 |
| 53. | Donkey Kong Country 3 | 225 | 0.44% | 6 | 0:00 |
| 54. | Muppet Monster Adventure | 206 | 0.40% | 8 | 0:00 |
| 55. | Snatcher | 204 | 0.40% | 16 | 0:00 |
| 56. | Ninja Gaiden | 204 | 0.40% | 5 | 30:48 |
| 57. | Rhapsody: A Musical Adventure | 199 | 0.39% | 9 | 0:00 |
| 58. | Kirby's Adventure | 198 | 0.38% | 7 | 2:03:19 |
| 59. | Incredible Crisis | 196 | 0.38% | 3 | 0:00 |
| 60. | Parasite Eve | 191 | 0.37% | 9 | 9:29:40 |
| 61. | Terranigma | 185 | 0.36% | 12 | 0:00 |
| 62. | Ninja Stealth | 184 | 0.36% | 8 | 2:24:19 |
| 63. | Brave Fencer Musashi | 183 | 0.36% | 21 | 10:35:33 |
| 64. | Mega Man X3 | 182 | 0.35% | 4 | 1:49:47 |
| 65. | Metal Max Returns | 179 | 0.35% | 13 | 10:09:02 |
| 66. | Scooby-Doo and the Cyber Chase | 176 | 0.34% | 3 | 0:00 |
| 67. | Zoda's Revenge: StarTropics II | 169 | 0.33% | 5 | 0:00 |
| 68. | Donkey Kong Country 2 | 168 | 0.33% | 5 | 0:00 |
| 69. | Dino Crisis 2 | 165 | 0.32% | 9 | 0:00 |
| 70. | Silent Hill | 164 | 0.32% | 10 | 0:00 |
| 71. | Countdown Vampires | 162 | 0.31% | 13 | 1:27:50 |
| 72. | Koudelka | 160 | 0.31% | 14 | 0:00 |
| 73. | ActRaiser | 155 | 0.30% | 7 | 2:34:10 |
| 74. | Super Mario Land 2: 6 Golden Coins | 155 | 0.30% | 5 | 1:19:48 |
| 75. | Shinobi III: Return of the Ninja Master | 154 | 0.30% | 5 | 1:08:48 |
| 76. | Castlevania: Bloodlines | 152 | 0.30% | 3 | 0:00 |
| 77. | Soul Blazer | 139 | 0.27% | 10 | 4:45:55 |
| 78. | Popful Mail | 132 | 0.26% | 10 | 0:00 |
| 79. | Kirby's Dream Land 3 | 126 | 0.24% | 6 | 1:33:11 |
| 80. | Gunstar Heroes | 124 | 0.24% | 5 | 1:11:56 |
| 81. | Super Bomberman 2 | 122 | 0.24% | 5 | 52:05 |
| 82. | Castlevania: Harmony of Dissonance | 119 | 0.23% | 9 | 0:00 |
| 83. | Demon's Crest | 114 | 0.22% | 6 | 0:00 |
| 84. | Mega Man 6 | 109 | 0.21% | 25 | 4:06:15 |
| 85. | Gundam: Battle Assault 2 | 108 | 0.21% | 3 | 39:54 |
| 86. | Bust a Groove | 107 | 0.21% | 2 | 23:48 |
| 87. | Mega Man X2 | 106 | 0.21% | 2 | 1:51:37 |
| 88. | Katamari Damacy | 103 | 0.20% | 6 | 0:00 |
| 89. | Ganbare Goemon 2 | 102 | 0.20% | 5 | 2:03:56 |
| 90. | Cadillacs and Dinosaurs | 95 | 0.18% | 2 | 0:00 |
| 91. | Metal Slug | 88 | 0.17% | 2 | 0:00 |
| 92. | Dragon Valor | 85 | 0.17% | 13 | 0:00 |
| 93. | Super Mario Bros. 3 | 84 | 0.16% | 9 | 2:58:09 |
| 94. | Rockin' Kats | 83 | 0.16% | 3 | 0:00 |
| 95. | Jimmy and the Pulsating Mass | 80 | 0.16% | 3 | 0:00 |
| 96. | Metroid Fusion | 74 | 0.14% | 4 | 0:00 |
| 97. | Gravity Circuit | 73 | 0.14% | 1 | 0:00 |
| 98. | Kirby's Dream Course | 73 | 0.14% | 4 | 0:00 |
| 99. | Donkey Kong Jr. | 72 | 0.14% | 1 | 6:33 |
| 100. | Guerrilla War | 72 | 0.14% | 2 | 0:00 |
