| 1. | WarioWare: Touched! | 938,097 | 13.31% | 2 | 3:37:05 |
| 2. | Star Fox 64 | 471,277 | 6.69% | 1 | 1:51:21 |
| 3. | Rhythm Heaven Fever | 456,955 | 6.48% | 1 | 51:43 |
| 4. | WarioWare, Inc.: Mega Microgames! | 410,830 | 5.83% | 3 | 3:02:34 |
| 5. | WarioWare: Smooth Moves | 390,345 | 5.54% | 1 | 1:08:29 |
| 6. | Super Ghouls 'n Ghosts | 285,458 | 4.05% | 1 | 29:48 |
| 7. | Yoshi's Story | 229,736 | 3.26% | 3 | 2:23:51 |
| 8. | WarioWare: Twisted! | 220,445 | 3.13% | 1 | 1:32:14 |
| 9. | Star Fox Zero | 208,334 | 2.96% | 1 | 2:10:27 |
| 10. | Mario Kart 64 | 170,991 | 2.43% | 1 | 50:19 |
| 11. | Mario Kart DS | 79,161 | 1.12% | 1 | 1:24:48 |
| 12. | New Super Mario Bros. 2 | 67,030 | 0.95% | 1 | 1:42:21 |
| 13. | The House of the Dead III | 61,086 | 0.87% | 1 | 38:18 |
| 14. | Sexy Parodius | 57,394 | 0.81% | 1 | 35:04 |
| 15. | Disney's Magical Mirror Starring Mickey Mouse | 49,012 | 0.70% | 2 | 2:02:30 |
| 16. | WarioWare: Get It Together! | 41,307 | 0.59% | 1 | 1:42:01 |
| 17. | Splatterhouse | 39,208 | 0.56% | 1 | 22:35 |
| 18. | Super Mario Kart | 33,382 | 0.47% | 1 | 39:21 |
| 19. | Wii Music | 32,972 | 0.47% | 1 | 35:16 |
| 20. | Mickey's Speedway USA | 25,976 | 0.37% | 1 | 53:46 |
| 21. | Stunt Race FX | 25,724 | 0.36% | 1 | 48:02 |
| 22. | Star Fox | 25,433 | 0.36% | 1 | 37:05 |
| 23. | Time Crisis | 25,204 | 0.36% | 1 | 38:38 |
| 24. | Luigi's Mansion | 23,693 | 0.34% | 4 | 4:24:11 |
| 25. | Out Run | 22,249 | 0.32% | 1 | 41:55 |
| 26. | Wii Play | 20,984 | 0.30% | 1 | 29:31 |
| 27. | Disney's Hide and Sneak | 18,261 | 0.26% | 1 | 1:30:48 |
| 28. | Wario Land 4 | 18,229 | 0.26% | 1 | 2:22:29 |
| 29. | Wave Race 64 | 16,194 | 0.23% | 1 | 39:53 |
| 30. | Ridge Racer 3D | 14,795 | 0.21% | 1 | 2:01:36 |
| 31. | Mario Kart: Double Dash!! | 13,899 | 0.20% | 1 | 51:30 |
| 32. | The Legend of Zelda | 13,710 | 0.19% | 2 | 1:30:17 |
| 33. | Pilotwings Resort | 12,913 | 0.18% | 1 | 52:35 |
| 34. | Urusei Yatsura: Stay With You | 11,448 | 0.16% | 3 | 2:26:09 |
| 35. | The Magical Quest Starring Mickey Mouse | 11,297 | 0.16% | 1 | 2:02:35 |
| 36. | Nintendo Puzzle Collection | 10,714 | 0.15% | 1 | 51:11 |
| 37. | Rhythm Tengoku | 10,205 | 0.14% | 1 | 1:27:40 |
| 38. | Team Sonic Racing | 10,205 | 0.14% | 1 | 29:16 |
| 39. | Nights into Dreams | 10,100 | 0.14% | 1 | 1:20:13 |
| 40. | Pop'n TwinBee | 9,495 | 0.13% | 1 | 45:56 |
| 41. | Kirby: Triple Deluxe | 9,328 | 0.13% | 1 | 37:14 |
| 42. | Panel de Pon | 9,120 | 0.13% | 1 | 37:50 |
| 43. | Excitebike 64 | 9,027 | 0.13% | 1 | 1:04:51 |
| 44. | Snoopy Concert | 8,888 | 0.13% | 1 | 1:30:36 |
| 45. | Donkey Kong: Barrel Blast | 8,464 | 0.12% | 1 | 57:11 |
| 46. | Sin and Punishment | 8,098 | 0.11% | 1 | 1:16:47 |
| 47. | OutRunners | 7,797 | 0.11% | 1 | 47:52 |
| 48. | Pilotwings 64 | 7,733 | 0.11% | 1 | 1:12:10 |
| 49. | The House of the Dead 4 | 7,506 | 0.11% | 1 | 55:04 |
| 50. | Rain | 7,244 | 0.10% | 1 | 0:00 |
| 51. | Fantasia | 6,584 | 0.09% | 1 | 18:23 |
| 52. | Ridge Racer Revolution | 6,480 | 0.09% | 1 | 1:08:27 |
| 53. | Mario Kart Wii | 6,242 | 0.09% | 1 | 1:43:27 |
| 54. | Ridge Racer 2 | 6,136 | 0.09% | 1 | 14:29 |
| 55. | Space Channel 5: Part 2 | 6,127 | 0.09% | 1 | 1:30:18 |
| 56. | Star Fox: Assault | 6,071 | 0.09% | 1 | 48:17 |
| 57. | Wagyan Paradise | 6,054 | 0.09% | 1 | 1:31:37 |
| 58. | Donkey Kong Country Returns | 5,931 | 0.08% | 1 | 47:29 |
| 59. | WarioWare: Move It! | 5,219 | 0.07% | 1 | 0:00 |
| 60. | Wave Race: Blue Storm | 5,081 | 0.07% | 1 | 54:01 |
| 61. | Klonoa: Door to Phantomile | 5,011 | 0.07% | 2 | 2:14:20 |
| 62. | F-Zero X | 4,960 | 0.07% | 1 | 56:24 |
| 63. | Eternal Darkness | 4,891 | 0.07% | 2 | 2:30:34 |
| 64. | Donald In the Magic Cap | 4,720 | 0.07% | 1 | 45:19 |
| 65. | Mr. Driller | 4,683 | 0.07% | 1 | 58:57 |
| 66. | Disney's Beauty and the Beast | 4,633 | 0.07% | 1 | 33:49 |
| 67. | Rage Racer | 4,313 | 0.06% | 2 | 1:35:51 |
| 68. | Tiny Toon Adventures | 4,023 | 0.06% | 1 | 41:37 |
| 69. | Puyo Puyo Sun | 3,978 | 0.06% | 1 | 56:00 |
| 70. | Time Crisis 3 | 3,827 | 0.05% | 1 | 40:13 |
| 71. | Wrecking Crew | 3,775 | 0.05% | 2 | 2:07:51 |
| 72. | The Ocean Hunter | 3,721 | 0.05% | 1 | 0:00 |
| 73. | TwinBee Yahho! | 3,560 | 0.05% | 1 | 23:49 |
| 74. | Crysis | 3,545 | 0.05% | 1 | 39:41 |
| 75. | Odama | 3,536 | 0.05% | 1 | 1:23:25 |
| 76. | The Legend of Zelda: Ocarina of Time | 3,437 | 0.05% | 2 | 2:03:17 |
| 77. | Time Crisis: Project Titan | 3,236 | 0.05% | 1 | 33:44 |
| 78. | Ninja Assault | 3,201 | 0.05% | 1 | 1:15:17 |
| 79. | Fatal Fury 3: Road to the Final Victory | 3,180 | 0.05% | 1 | 24:01 |
| 80. | NES Remix Pack | 3,171 | 0.04% | 1 | 1:32:45 |
| 81. | Technicbeat | 3,150 | 0.04% | 1 | 48:04 |
| 82. | Disney Sports Skateboarding | 2,986 | 0.04% | 1 | 40:01 |
| 83. | 1-2-Switch | 2,985 | 0.04% | 6 | 4:23:14 |
| 84. | Time Crisis II | 2,826 | 0.04% | 1 | 26:10 |
| 85. | The Legend of the Mystical Ninja | 2,764 | 0.04% | 1 | 1:35:09 |
| 86. | With You | 2,720 | 0.04% | 1 | 30:28 |
| 87. | Disney's Aladdin | 2,701 | 0.04% | 1 | 33:06 |
| 88. | Sonic Mania Plus | 2,626 | 0.04% | 2 | 1:56:12 |
| 89. | Super Mario Land | 2,624 | 0.04% | 1 | 33:43 |
| 90. | Sonic the Hedgehog | 2,572 | 0.04% | 1 | 54:46 |
| 91. | Michael Jackson's Moonwalker | 2,478 | 0.04% | 1 | 38:24 |
| 92. | Kirby: Nightmare in Dream Land | 2,380 | 0.03% | 2 | 1:42:11 |
| 93. | Legend of Illusion Starring Mickey Mouse | 2,327 | 0.03% | 1 | 36:17 |
| 94. | Sakura Samurai: Art of the Sword | 2,272 | 0.03% | 2 | 1:19:11 |
| 95. | Mickey Mania | 2,167 | 0.03% | 1 | 34:48 |
| 96. | Pac-Man Museum | 2,156 | 0.03% | 1 | 2:01:25 |
| 97. | Mr. Driller G | 2,124 | 0.03% | 1 | 1:15:16 |
| 98. | Gradius V | 2,069 | 0.03% | 1 | 1:16:32 |
| 99. | Cuphead | 2,028 | 0.03% | 1 | 1:09:30 |
| 100. | Ghoul Panic | 1,974 | 0.03% | 1 | 20:58 |
