| 1. | New Super Mario Bros. Wii | 5,375,316 | 6.26% | 6 | 5:34:56 |
| 2. | Super Mario Bros. 3 | 4,492,754 | 5.23% | 27 | 9:15:12 |
| 3. | Super Mario World | 3,887,870 | 4.53% | 57 | 1:11:12:11 |
| 4. | Pepsiman | 2,713,191 | 3.16% | 3 | 1:05:01 |
| 5. | Crash Bandicoot Purple: Ripto's Rampage and Spyro Orange: The Cortex Conspiracy | 2,318,944 | 2.70% | 1 | 42:28 |
| 6. | Super Mario Bros. | 1,463,913 | 1.70% | 127 | 19:48:56 |
| 7. | Mega Man X2 | 1,247,884 | 1.45% | 10 | 5:34:43 |
| 8. | Mega Man X3 | 1,032,067 | 1.20% | 9 | 6:18:10 |
| 9. | Super Metroid | 926,036 | 1.08% | 51 | 1:10:53:06 |
| 10. | Super Smash Bros. Brawl | 713,417 | 0.83% | 4 | 4:44:42 |
| 11. | Mega Man X | 692,011 | 0.81% | 16 | 8:35:27 |
| 12. | New Super Mario Bros. | 666,351 | 0.78% | 13 | 9:24:04 |
| 13. | Super Mario 64 | 638,325 | 0.74% | 19 | 13:01:20 |
| 14. | The Legend of Zelda: A Link to the Past | 601,136 | 0.70% | 13 | 6:01:56 |
| 15. | Mario Kart 64 | 586,623 | 0.68% | 1 | 23:28 |
| 16. | Donkey Kong Country 2 | 565,129 | 0.66% | 11 | 10:42:00 |
| 17. | Mega Man 4 | 557,996 | 0.65% | 13 | 7:13:29 |
| 18. | Banjo-Kazooie | 535,002 | 0.62% | 2 | 4:53:11 |
| 19. | The Legend of Zelda | 534,581 | 0.62% | 18 | 6:59:21 |
| 20. | Super Punch-Out!! | 516,252 | 0.60% | 9 | 2:21:48 |
| 21. | Punch-Out!! | 512,571 | 0.60% | 16 | 2:10:58 |
| 22. | Super Mario Kart | 505,904 | 0.59% | 2 | 48:12 |
| 23. | Sonic the Hedgehog 2 | 505,107 | 0.59% | 27 | 10:23:39 |
| 24. | Sonic the Hedgehog 3 | 493,763 | 0.57% | 35 | 20:37:16 |
| 25. | Mega Man 2 | 485,168 | 0.56% | 26 | 10:57:06 |
| 26. | Resident Evil 4 | 459,167 | 0.53% | 6 | 2:05:28 |
| 27. | Super Mario Bros. 2 | 449,126 | 0.52% | 29 | 4:46:17 |
| 28. | Donkey Kong Country 3 | 422,102 | 0.49% | 5 | 5:36:47 |
| 29. | Luigi's Mansion | 408,310 | 0.48% | 6 | 2:50:46 |
| 30. | Donkey Kong Country | 388,787 | 0.45% | 21 | 10:24:45 |
| 31. | Castlevania: Aria of Sorrow | 386,644 | 0.45% | 22 | 3:34:21 |
| 32. | Super Smash Bros. Ultimate | 377,324 | 0.44% | 4 | 6:19:33 |
| 33. | Castlevania: Portrait of Ruin | 358,949 | 0.42% | 11 | 3:56:12 |
| 34. | Metroid: Zero Mission | 357,313 | 0.42% | 11 | 7:30:28 |
| 35. | Super Smash Bros. | 356,624 | 0.42% | 5 | 41:25 |
| 36. | Pink Panther: Pinkadelic Pursuit | 337,371 | 0.39% | 5 | 1:55:29 |
| 37. | Super Mario RPG | 333,421 | 0.39% | 9 | 23:16:40 |
| 38. | The Simpsons: Bart's Nightmare | 319,463 | 0.37% | 3 | 52:12 |
| 39. | Super Mario World 2: Yoshi's Island | 313,876 | 0.37% | 9 | 7:44:10 |
| 40. | Earthbound | 310,019 | 0.36% | 17 | 17:38:16 |
| 41. | Donkey Kong | 297,170 | 0.35% | 30 | 2:03:08 |
| 42. | Mario Bros. | 289,483 | 0.34% | 20 | 4:55:32 |
| 43. | Super Mario All-Stars | 287,261 | 0.33% | 8 | 3:51:44 |
| 44. | Mortal Kombat Mythologies: Sub-Zero | 284,900 | 0.33% | 3 | 1:17:22 |
| 45. | Zelda II: The Adventure of Link | 277,045 | 0.32% | 16 | 8:22:36 |
| 46. | Crash Bandicoot 2: Cortex Strikes Back | 259,858 | 0.30% | 4 | 2:13:30 |
| 47. | Yu-Gi-Oh! 5D's World Championship 2011: Over the Nexus | 256,459 | 0.30% | 2 | 3:25:02 |
| 48. | Metal Slug 3 | 256,410 | 0.30% | 2 | 59:26 |
| 49. | Super Mario Advance 4: Super Mario Bros. 3 | 248,675 | 0.29% | 3 | 2:08:02 |
| 50. | The King of Fighters '97 | 246,974 | 0.29% | 1 | 19:31 |
| 51. | Castlevania III: Dracula's Curse | 240,346 | 0.28% | 13 | 4:27:41 |
| 52. | The Legend of Zelda: Link's Awakening | 239,532 | 0.28% | 18 | 7:32:56 |
| 53. | Bomberman 64 | 236,017 | 0.27% | 3 | 2:34:00 |
| 54. | Street Fighter II | 233,809 | 0.27% | 9 | 2:15:02 |
| 55. | Marvel vs. Capcom: Clash of Super Heroes | 231,827 | 0.27% | 2 | 34:16 |
| 56. | Dragon Ball: Advanced Adventure | 228,770 | 0.27% | 3 | 1:57:17 |
| 57. | Castlevania: Symphony of the Night | 227,268 | 0.26% | 17 | 5:49:41 |
| 58. | Kingdom Hearts: Chain of Memories | 223,175 | 0.26% | 2 | 2:11:25 |
| 59. | Mega Man 3 | 222,794 | 0.26% | 13 | 5:43:20 |
| 60. | Rayman | 221,514 | 0.26% | 1 | 1:05:15 |
| 61. | Paper Mario: The Thousand-Year Door | 218,627 | 0.25% | 7 | 19:39:21 |
| 62. | Pokémon Red and Blue | 216,270 | 0.25% | 24 | 23:55:17 |
| 63. | Mario Party | 214,529 | 0.25% | 3 | 1:21:12 |
| 64. | Kirby & the Amazing Mirror | 213,837 | 0.25% | 3 | 1:55:34 |
| 65. | The Legend of Zelda: Ocarina of Time | 212,636 | 0.25% | 15 | 22:26:39 |
| 66. | Paper Mario | 210,640 | 0.25% | 3 | 4:19:57 |
| 67. | Mega Man 6 | 209,747 | 0.24% | 7 | 3:40:46 |
| 68. | Metroid Fusion | 202,632 | 0.24% | 7 | 7:50:31 |
| 69. | Super Smash Bros. Melee | 201,847 | 0.23% | 5 | 39:58 |
| 70. | Contra | 201,534 | 0.23% | 23 | 4:01:36 |
| 71. | Oddworld: Abe's Exoddus | 196,828 | 0.23% | 6 | 7:19:35 |
| 72. | Mega Man | 195,217 | 0.23% | 23 | 6:41:08 |
| 73. | Pokémon Emerald | 195,190 | 0.23% | 6 | 6:23:57 |
| 74. | Samurai Shodown IV: Amakusa's Revenge | 192,353 | 0.22% | 2 | 30:38 |
| 75. | Castlevania | 190,366 | 0.22% | 14 | 3:12:24 |
| 76. | Arkanoid | 189,011 | 0.22% | 8 | 53:17 |
| 77. | Pokémon FireRed and LeafGreen | 186,505 | 0.22% | 4 | 7:35:16 |
| 78. | Sonic Advance | 181,765 | 0.21% | 16 | 5:17:22 |
| 79. | Lunar Pool | 180,998 | 0.21% | 7 | 1:02:25 |
| 80. | Spider-Man 2 | 178,906 | 0.21% | 6 | 3:03:38 |
| 81. | Tekken 3 | 178,822 | 0.21% | 7 | 34:37 |
| 82. | Spyro: Year of the Dragon | 177,254 | 0.21% | 4 | 5:05:38 |
| 83. | Super Contra | 177,065 | 0.21% | 16 | 2:14:50 |
| 84. | Syobon Action | 174,716 | 0.20% | 4 | 13:20 |
| 85. | Disney's Aladdin | 173,064 | 0.20% | 18 | 4:19:45 |
| 86. | Diddy Kong Racing | 172,231 | 0.20% | 1 | 2:09:22 |
| 87. | World of Goo | 171,657 | 0.20% | 1 | 35:44 |
| 88. | Castlevania: Harmony of Dissonance | 169,772 | 0.20% | 21 | 2:25:19 |
| 89. | Mega Man 9 | 168,319 | 0.20% | 1 | 34:11 |
| 90. | Sonic Advance 3 | 168,231 | 0.20% | 5 | 3:52:22 |
| 91. | Metal Gear Solid 2: Sons of Liberty | 167,885 | 0.20% | 1 | 2:10:49 |
| 92. | Super Mario Bros. Deluxe | 163,122 | 0.19% | 11 | 43:58 |
| 93. | Pucca's Kisses | 162,545 | 0.19% | 1 | 48:50 |
| 94. | Pokémon Gold and Silver | 158,501 | 0.18% | 10 | 12:53:50 |
| 95. | Killer Instinct | 154,891 | 0.18% | 2 | 19:40 |
| 96. | Battletoads | 152,849 | 0.18% | 18 | 4:49:02 |
| 97. | Neo Turf Masters | 152,534 | 0.18% | 3 | 1:05:19 |
| 98. | Mega Man 7 | 150,946 | 0.18% | 8 | 2:52:22 |
| 99. | Crash Bandicoot: Warped | 144,721 | 0.17% | 5 | 3:23:57 |
| 100. | Sonic the Hedgehog | 144,157 | 0.17% | 19 | 3:31:59 |
