| 1. | Final Fantasy IV: The After Years | 664,755 | 9.87% | 152 | 1:00:39:23 |
| 2. | Trauma Team | 275,761 | 4.09% | 108 | 23:53:32 |
| 3. | Final Fantasy Mystic Quest | 253,246 | 3.76% | 7 | 19:26 |
| 4. | Final Fantasy VI | 249,601 | 3.70% | 52 | 2:36:56 |
| 5. | Lunar: Eternal Blue | 123,595 | 1.83% | 4 | 15:15 |
| 6. | Tactics Ogre: Let Us Cling Together | 118,689 | 1.76% | 63 | 16:06:24 |
| 7. | Ys Seven | 107,707 | 1.60% | 60 | 16:07:44 |
| 8. | Final Fantasy XI | 95,441 | 1.42% | 5 | 29:58 |
| 9. | Chrono Trigger | 94,384 | 1.40% | 13 | 47:01 |
| 10. | Valkyrie Profile 2: Silmeria | 92,601 | 1.37% | 2 | 3:45 |
| 11. | Wild Arms 5 | 92,248 | 1.37% | 5 | 18:36 |
| 12. | Star Ocean: The Second Story | 82,312 | 1.22% | 5 | 11:24 |
| 13. | Ys Origin | 74,766 | 1.11% | 5 | 18:05 |
| 14. | Suikoden IV | 74,564 | 1.11% | 1 | 1:22 |
| 15. | Parasite Eve | 73,513 | 1.09% | 4 | 12:54 |
| 16. | Odin Sphere | 72,684 | 1.08% | 4 | 13:39 |
| 17. | Breath of Fire III | 72,503 | 1.08% | 4 | 11:19 |
| 18. | The Legend of Heroes: Trails in the Sky | 70,359 | 1.04% | 3 | 18:50 |
| 19. | Ar Tonelico II: Melody of Metafalica | 70,074 | 1.04% | 74 | 12:08:40 |
| 20. | Suikoden II | 67,112 | 1.00% | 3 | 11:07 |
| 21. | Half-Minute Hero | 66,955 | 0.99% | 54 | 9:59:32 |
| 22. | Ys: The Oath in Felghana | 66,130 | 0.98% | 39 | 8:27:03 |
| 23. | Dragon Quest VIII: The Journey of the Cursed King | 64,447 | 0.96% | 5 | 21:31 |
| 24. | Trauma Center: Second Opinion | 61,744 | 0.92% | 39 | 5:45:36 |
| 25. | Valkyrie Profile | 61,615 | 0.91% | 5 | 10:10 |
| 26. | Final Fantasy XIV | 55,547 | 0.82% | 4 | 13:13 |
| 27. | Zone of the Enders | 51,810 | 0.77% | 47 | 7:27:12 |
| 28. | Skies of Arcadia | 50,091 | 0.74% | 4 | 9:52 |
| 29. | Terranigma | 47,372 | 0.70% | 4 | 9:45 |
| 30. | Xenogears | 47,146 | 0.70% | 2 | 6:10 |
| 31. | Muramasa: The Demon Blade | 46,313 | 0.69% | 97 | 14:03:05 |
| 32. | Ar Tonelico: Melody of Elemia | 42,999 | 0.64% | 3 | 6:18 |
| 33. | Castlevania: Symphony of the Night | 40,939 | 0.61% | 5 | 13:04 |
| 34. | Super Mario RPG | 39,390 | 0.58% | 3 | 7:01 |
| 35. | Final Fantasy VIII | 39,159 | 0.58% | 2 | 6:43 |
| 36. | Chrono Cross | 38,899 | 0.58% | 2 | 5:54 |
| 37. | Langrisser II | 38,735 | 0.57% | 5 | 26:35 |
| 38. | Dawn of Mana | 38,717 | 0.57% | 1 | 5:18 |
| 39. | Disgaea 2: Cursed Memories | 36,819 | 0.55% | 2 | 4:12 |
| 40. | Ys: The Ark of Napishtim | 35,352 | 0.52% | 2 | 9:35 |
| 41. | Ys II Eternal | 35,270 | 0.52% | 2 | 5:53 |
| 42. | Seiken Densetsu 3 | 35,262 | 0.52% | 1 | 3:17 |
| 43. | Valkyria Chronicles | 31,952 | 0.47% | 1 | 2:50 |
| 44. | Final Fantasy VII Remake | 30,440 | 0.45% | 2 | 5:35 |
| 45. | Castlevania: Order of Ecclesia | 26,821 | 0.40% | 5 | 12:47 |
| 46. | Wild Arms | 26,784 | 0.40% | 4 | 6:06 |
| 47. | Final Fantasy VII | 26,766 | 0.40% | 3 | 10:09 |
| 48. | Soulcalibur V | 26,111 | 0.39% | 1 | 5:50 |
| 49. | No More Heroes 2: Desperate Struggle | 25,024 | 0.37% | 2 | 8:05 |
| 50. | Suikoden V | 24,025 | 0.36% | 4 | 9:41 |
| 51. | Lost Odyssey | 23,185 | 0.34% | 2 | 4:26 |
| 52. | Phantasy Star IV | 22,549 | 0.33% | 4 | 10:41 |
| 53. | Super Robot Wars A | 22,161 | 0.33% | 2 | 5:29 |
| 54. | Persona 2: Eternal Punishment | 22,067 | 0.33% | 1 | 1:25 |
| 55. | Xenosaga Episode I | 21,741 | 0.32% | 1 | 5:37 |
| 56. | Super Robot Wars MX | 21,051 | 0.31% | 1 | 5:39 |
| 57. | Lufia II: Rise of the Sinistrals | 21,024 | 0.31% | 4 | 10:16 |
| 58. | Atelier Iris 3: Grand Phantasm | 20,462 | 0.30% | 2 | 5:11 |
| 59. | Dishonored 2 | 20,294 | 0.30% | 4 | 9:26 |
| 60. | Kingdom Hearts II | 18,997 | 0.28% | 4 | 11:29 |
| 61. | Disgaea: Hour of Darkness | 18,906 | 0.28% | 3 | 11:17 |
| 62. | Legend of Mana | 18,829 | 0.28% | 3 | 9:08 |
| 63. | Mother 3 | 18,273 | 0.27% | 1 | 2:49 |
| 64. | Illusion of Gaia | 18,050 | 0.27% | 3 | 11:20 |
| 65. | Suikoden III | 18,038 | 0.27% | 2 | 5:26 |
| 66. | Legend of Mana | 17,875 | 0.27% | 2 | 10:21 |
| 67. | Secret of Mana | 17,749 | 0.26% | 1 | 1:59 |
| 68. | Persona 2: Innocent Sin | 17,706 | 0.26% | 1 | 1:12 |
| 69. | Final Fantasy IV | 16,459 | 0.24% | 17 | 3:29:37 |
| 70. | Tales of Destiny | 16,394 | 0.24% | 2 | 3:39 |
| 71. | Final Fantasy IV | 16,218 | 0.24% | 9 | 1:54:49 |
| 72. | Shadow Hearts: Covenant | 15,917 | 0.24% | 6 | 25:40 |
| 73. | Phantasy Star Online | 14,957 | 0.22% | 3 | 6:57 |
| 74. | Lunar: Silver Star Story Complete | 14,683 | 0.22% | 2 | 4:26 |
| 75. | The Legend of Zelda: A Link to the Past | 14,514 | 0.22% | 3 | 5:33 |
| 76. | Street Fighter II | 14,308 | 0.21% | 3 | 5:50 |
| 77. | Super Ghouls 'n Ghosts | 14,106 | 0.21% | 1 | 2:35 |
| 78. | Dungeons | 14,081 | 0.21% | 6 | 14:59 |
| 79. | Front Mission | 13,999 | 0.21% | 2 | 2:49 |
| 80. | Alundra | 13,803 | 0.20% | 2 | 4:16 |
| 81. | Final Fantasy X | 13,737 | 0.20% | 2 | 6:17 |
| 82. | Shin Megami Tensei III: Nocturne | 13,664 | 0.20% | 2 | 5:56 |
| 83. | Final Fantasy V | 13,513 | 0.20% | 3 | 5:48 |
| 84. | Tales of Vesperia | 13,289 | 0.20% | 1 | 3:28 |
| 85. | The Legend of Dragoon | 13,013 | 0.19% | 1 | 2:22 |
| 86. | Wild Arms 3 | 12,398 | 0.18% | 1 | 1:44 |
| 87. | Namco × Capcom | 11,944 | 0.18% | 2 | 6:15 |
| 88. | Super Bomberman | 11,744 | 0.17% | 2 | 4:20 |
| 89. | Shin Megami Tensei | 11,734 | 0.17% | 1 | 5:23 |
| 90. | Star Ocean: Till the End of Time | 11,528 | 0.17% | 3 | 6:40 |
| 91. | Shadow Hearts: From the New World | 11,518 | 0.17% | 4 | 10:08 |
| 92. | Donkey Kong Country 3 | 11,114 | 0.16% | 1 | 1:39 |
| 93. | Donkey Kong Country | 10,276 | 0.15% | 2 | 7:09 |
| 94. | Mega Man X2 | 10,275 | 0.15% | 3 | 5:06 |
| 95. | Suikoden: Tierkreis | 9,483 | 0.14% | 2 | 6:50 |
| 96. | Secret of Evermore | 9,359 | 0.14% | 2 | 6:39 |
| 97. | Ys IV: Mask of the Sun | 8,963 | 0.13% | 3 | 10:35 |
| 98. | Tetris Attack | 8,617 | 0.13% | 2 | 6:11 |
| 99. | Super Castlevania IV | 8,340 | 0.12% | 3 | 8:33 |
| 100. | Gradius III | 7,386 | 0.11% | 2 | 3:44 |
