| 1. | Super Mario World | 2,894,692 | 23.48% | 50 | 3:54:39 |
| 2. | Super Mario Bros. 3 | 1,640,583 | 13.31% | 18 | 1:06:30 |
| 3. | Mega Man X | 1,407,840 | 11.42% | 20 | 1:38:27 |
| 4. | Super Mario World 2: Yoshi's Island | 883,385 | 7.17% | 42 | 3:41:08 |
| 5. | Donkey Kong Country 2 | 518,374 | 4.21% | 27 | 1:18:31 |
| 6. | Donkey Kong Country | 484,633 | 3.93% | 22 | 2:11:55 |
| 7. | Mega Man X2 | 366,173 | 2.97% | 6 | 27:01 |
| 8. | Super Mario 64 | 239,478 | 1.94% | 3 | 21:53 |
| 9. | Donkey Kong Country 3 | 202,927 | 1.65% | 13 | 23:25 |
| 10. | Mega Man X3 | 201,700 | 1.64% | 4 | 6:40 |
| 11. | Killer Instinct | 188,492 | 1.53% | 5 | 6:52 |
| 12. | Super Mario Kart | 148,694 | 1.21% | 6 | 11:22 |
| 13. | Super Mario Bros. 2 | 140,223 | 1.14% | 7 | 18:23 |
| 14. | Super Mario Bros. | 121,902 | 0.99% | 8 | 29:33 |
| 15. | Super Bomberman | 114,154 | 0.93% | 2 | 8:29 |
| 16. | Star Fox | 111,551 | 0.90% | 9 | 1:00:08 |
| 17. | Mortal Kombat | 104,516 | 0.85% | 2 | 12:50 |
| 18. | Mega Man 7 | 96,327 | 0.78% | 3 | 13:18 |
| 19. | Super Metroid | 82,219 | 0.67% | 4 | 22:03 |
| 20. | Kirby Super Star | 79,581 | 0.65% | 6 | 1:04:51 |
| 21. | Mega Man 2 | 65,638 | 0.53% | 1 | 8:27 |
| 22. | Super Mario RPG | 62,152 | 0.50% | 5 | 15:42 |
| 23. | Mega Man X6 | 61,468 | 0.50% | 1 | 14:14 |
| 24. | Super Mario Galaxy 2 | 60,262 | 0.49% | 1 | 12:34 |
| 25. | Star Fox 2 | 55,988 | 0.45% | 8 | 1:52:38 |
| 26. | Mega Man ZX | 51,544 | 0.42% | 1 | 12:54 |
| 27. | Super Bomberman 5 | 50,150 | 0.41% | 2 | 4:59 |
| 28. | Earthworm Jim 2 | 46,725 | 0.38% | 7 | 26:22 |
| 29. | Mario Bros. | 44,627 | 0.36% | 2 | 17:48 |
| 30. | Sonic the Hedgehog 4: Episode I | 44,053 | 0.36% | 1 | 9:19 |
| 31. | Mega Man 3 | 40,769 | 0.33% | 1 | 11:34 |
| 32. | Super Bomberman 2 | 40,093 | 0.33% | 1 | 2:01 |
| 33. | Dragon Ball Z: Super Butōden | 37,572 | 0.30% | 1 | 2:22 |
| 34. | Kirby's Epic Yarn | 37,337 | 0.30% | 1 | 6:15 |
| 35. | Mortal Kombat II | 36,097 | 0.29% | 2 | 17:55 |
| 36. | The Legend of Zelda: Majora's Mask | 35,346 | 0.29% | 1 | 11:47 |
| 37. | The Legend of Zelda: Ocarina of Time | 33,070 | 0.27% | 2 | 52:11 |
| 38. | Super Mario Bros.: The Lost Levels | 31,496 | 0.26% | 3 | 17:17 |
| 39. | Super Contra | 30,793 | 0.25% | 2 | 1:06:02 |
| 40. | Chrono Trigger | 30,689 | 0.25% | 3 | 37:17 |
| 41. | Earthworm Jim | 30,520 | 0.25% | 5 | 10:45 |
| 42. | Super Mario All-Stars | 29,549 | 0.24% | 2 | 11:26 |
| 43. | Final Fantasy VI | 28,142 | 0.23% | 3 | 7:55 |
| 44. | Goof Troop | 27,046 | 0.22% | 6 | 42:46 |
| 45. | International Superstar Soccer Deluxe | 24,910 | 0.20% | 3 | 5:11 |
| 46. | Ultimate Mortal Kombat 3 | 24,177 | 0.20% | 1 | 1:09 |
| 47. | Earthbound | 23,562 | 0.19% | 3 | 2:27:33 |
| 48. | Uniracers | 22,987 | 0.19% | 4 | 24:02 |
| 49. | Super Smash Bros. for Wii U | 22,008 | 0.18% | 2 | 15:49 |
| 50. | Cool Spot | 21,825 | 0.18% | 1 | 2:50 |
| 51. | Kirby 64: The Crystal Shards | 21,769 | 0.18% | 1 | 6:53 |
| 52. | Super Bomberman 4 | 21,649 | 0.18% | 1 | 2:50 |
| 53. | Harvest Moon | 21,369 | 0.17% | 1 | 2:45 |
| 54. | Kirby's Dream Course | 21,021 | 0.17% | 5 | 36:17 |
| 55. | Star Fox 64 | 19,144 | 0.16% | 2 | 46:36 |
| 56. | Contra III: The Alien Wars | 18,960 | 0.15% | 3 | 11:07 |
| 57. | Rayman | 18,016 | 0.15% | 2 | 19:48 |
| 58. | Super Mario Maker | 17,548 | 0.14% | 1 | 21:22 |
| 59. | Troddlers | 17,356 | 0.14% | 16 | 2:20:34 |
| 60. | Axelay | 17,062 | 0.14% | 3 | 11:12 |
| 61. | Contra | 16,611 | 0.13% | 1 | 50:01 |
| 62. | Castlevania: Dracula X | 16,523 | 0.13% | 1 | 3:51 |
| 63. | Mario Kart 64 | 16,486 | 0.13% | 2 | 14:51 |
| 64. | The Legend of Zelda: A Link to the Past | 16,284 | 0.13% | 2 | 5:12 |
| 65. | Mario Paint | 16,167 | 0.13% | 2 | 9:22 |
| 66. | Gradius | 14,698 | 0.12% | 1 | 10:23 |
| 67. | Final Fantasy V | 14,066 | 0.11% | 2 | 5:13 |
| 68. | Nightmare Busters | 13,302 | 0.11% | 1 | 5:40 |
| 69. | Bomberman B-Daman | 13,267 | 0.11% | 5 | 31:46 |
| 70. | Toy Story | 13,186 | 0.11% | 2 | 2:26 |
| 71. | Kirby's Adventure | 12,708 | 0.10% | 1 | 3:38 |
| 72. | Gradius III | 12,411 | 0.10% | 2 | 15:03 |
| 73. | Super Mario Land 2: 6 Golden Coins | 11,929 | 0.10% | 1 | 2:03 |
| 74. | Final Fight 3 | 11,748 | 0.10% | 1 | 1:35 |
| 75. | The Callisto Protocol | 10,367 | 0.08% | 3 | 48:11 |
| 76. | Final Fight | 9,650 | 0.08% | 1 | 5:21 |
| 77. | Super Smash Bros. Brawl | 9,372 | 0.08% | 1 | 10:21 |
| 78. | Super Mario 3D Land | 9,207 | 0.07% | 1 | 11:03 |
| 79. | Mystic Ark | 9,093 | 0.07% | 1 | 6:47 |
| 80. | Kirby's Dream Land 3 | 9,015 | 0.07% | 1 | 9:31 |
| 81. | Plok | 8,820 | 0.07% | 4 | 23:20 |
| 82. | Wario Land: Super Mario Land 3 | 8,755 | 0.07% | 1 | 2:58 |
| 83. | Super Castlevania IV | 8,682 | 0.07% | 1 | 1:17 |
| 84. | Bahamut Lagoon | 8,588 | 0.07% | 1 | 6:45 |
| 85. | The Legend of Zelda: Link's Awakening | 8,414 | 0.07% | 1 | 3:08 |
| 86. | Quiz Show | 8,364 | 0.07% | 7 | 25:49 |
| 87. | Star Fox Zero | 8,208 | 0.07% | 1 | 9:00 |
| 88. | Shovel Knight | 8,133 | 0.07% | 1 | 7:14 |
| 89. | Star Fox Adventures | 8,046 | 0.07% | 1 | 11:36 |
| 90. | 99Vidas | 8,017 | 0.07% | 1 | 1:14 |
| 91. | Street Fighter 6 | 7,957 | 0.06% | 1 | 6:38 |
| 92. | Star Fox Command | 7,152 | 0.06% | 1 | 7:47 |
| 93. | Wild Guns | 7,023 | 0.06% | 1 | 9:52 |
| 94. | Mickey Mania | 6,983 | 0.06% | 2 | 2:16 |
| 95. | Breath of Fire | 6,823 | 0.06% | 2 | 6:34 |
| 96. | Super Ghouls 'n Ghosts | 6,610 | 0.05% | 2 | 13:41 |
| 97. | The Firemen | 6,511 | 0.05% | 1 | 7:29 |
| 98. | Street Fighter X Mega Man | 6,292 | 0.05% | 1 | 6:47 |
| 99. | Street Fighter: Alpha 2 | 6,179 | 0.05% | 1 | 2:26 |
| 100. | Super Mario Land | 6,152 | 0.05% | 1 | 1:08 |
