| 1. | Super Mario Bros. | 694,577 | 12.98% | 13 | 2:37:35 |
| 2. | I Wanna Be the Guy | 568,752 | 10.63% | 2 | 46:32 |
| 3. | Teenage Mutant Ninja Turtles III: The Manhattan Project | 376,053 | 7.03% | 3 | 1:20:49 |
| 4. | Super Mario Bros. 2 | 195,156 | 3.65% | 4 | 41:12 |
| 5. | Contra | 152,381 | 2.85% | 5 | 57:47 |
| 6. | Battletoads/Double Dragon | 142,690 | 2.67% | 24 | 2:13:48 |
| 7. | Teenage Mutant Ninja Turtles | 138,869 | 2.60% | 4 | 1:41:15 |
| 8. | Contra: Hard Corps | 123,372 | 2.31% | 8 | 2:29:28 |
| 9. | Battletoads | 112,920 | 2.11% | 22 | 3:19:44 |
| 10. | Digital Devil Story: Megami Tensei II | 108,355 | 2.03% | 1 | 1:30:52 |
| 11. | Super Contra | 93,973 | 1.76% | 6 | 1:22:17 |
| 12. | Castlevania III: Dracula's Curse | 93,432 | 1.75% | 5 | 2:37:38 |
| 13. | Metal Slug | 76,219 | 1.42% | 2 | 32:15 |
| 14. | Sonic the Hedgehog 2 | 75,111 | 1.40% | 1 | 23:00 |
| 15. | Tiny Toon Adventures | 72,909 | 1.36% | 1 | 13:14 |
| 16. | Comix Zone | 63,246 | 1.18% | 2 | 33:04 |
| 17. | Gimmick! | 61,376 | 1.15% | 3 | 48:12 |
| 18. | Super Mario All-Stars | 59,271 | 1.11% | 2 | 1:12:42 |
| 19. | Super Ghouls 'n Ghosts | 58,791 | 1.10% | 2 | 2:34:01 |
| 20. | Ninja Gaiden II | 58,787 | 1.10% | 1 | 43:15 |
| 21. | Super Mario World | 58,702 | 1.10% | 1 | 46:16 |
| 22. | Disney's Aladdin | 54,523 | 1.02% | 2 | 35:04 |
| 23. | Donkey Kong Country 2 | 49,673 | 0.93% | 1 | 1:31:32 |
| 24. | Final Fantasy | 46,933 | 0.88% | 1 | 1:15:04 |
| 25. | Ristar | 43,836 | 0.82% | 3 | 1:03:33 |
| 26. | Darkwing Duck | 43,629 | 0.82% | 1 | 11:57 |
| 27. | Streets of Rage 2 | 40,178 | 0.75% | 1 | 25:21 |
| 28. | Metal Slug Advance | 37,052 | 0.69% | 3 | 1:12:57 |
| 29. | Dr. Mario | 36,794 | 0.69% | 2 | 7:02 |
| 30. | Chip 'n Dale Rescue Rangers | 34,222 | 0.64% | 1 | 10:50 |
| 31. | Teenage Mutant Ninja Turtles: Turtles in Time | 33,444 | 0.63% | 2 | 1:15:54 |
| 32. | River City Ransom | 32,543 | 0.61% | 1 | 15:12 |
| 33. | Mega Man & Bass | 32,412 | 0.61% | 1 | 50:50 |
| 34. | Batman: The Animated Series | 32,330 | 0.60% | 1 | 46:57 |
| 35. | Zen: Intergalactic Ninja | 31,821 | 0.59% | 6 | 1:19:49 |
| 36. | Castlevania: Bloodlines | 31,798 | 0.59% | 2 | 1:02:41 |
| 37. | Double Dragon II | 31,236 | 0.58% | 2 | 21:51 |
| 38. | Batman: The Video Game | 29,330 | 0.55% | 3 | 39:50 |
| 39. | Super Metroid | 29,176 | 0.55% | 9 | 4:05:05 |
| 40. | Tekken Advance | 26,916 | 0.50% | 1 | 9:28 |
| 41. | Sonic the Hedgehog | 25,313 | 0.47% | 2 | 34:54 |
| 42. | Castlevania: Harmony of Dissonance | 24,248 | 0.45% | 2 | 39:48 |
| 43. | Batman: Arkham City | 23,836 | 0.45% | 1 | 2:45:03 |
| 44. | Ghosts 'n Goblins | 23,808 | 0.45% | 1 | 6:36 |
| 45. | The Jungle Book | 20,831 | 0.39% | 3 | 55:51 |
| 46. | Sweet Home | 20,433 | 0.38% | 1 | 3:29:06 |
| 47. | Ninja Gaiden III: The Ancient Ship of Doom | 20,243 | 0.38% | 4 | 1:06:04 |
| 48. | Lagrange Point | 19,631 | 0.37% | 1 | 1:12:01 |
| 49. | Chip 'n Dale Rescue Rangers 2 | 19,599 | 0.37% | 2 | 24:53 |
| 50. | Tiny Toon Adventures: Buster Busts Loose! | 18,861 | 0.35% | 1 | 23:49 |
| 51. | DuckTales 2 | 17,822 | 0.33% | 3 | 44:34 |
| 52. | Street Fighter III | 15,598 | 0.29% | 1 | 9:59 |
| 53. | Mortal Kombat 11 | 15,511 | 0.29% | 1 | 15:01 |
| 54. | Banana Prince | 14,663 | 0.27% | 2 | 23:22 |
| 55. | Bram Stoker's Dracula | 14,470 | 0.27% | 1 | 14:59 |
| 56. | Shatterhand | 13,712 | 0.26% | 1 | 21:05 |
| 57. | Batman: Return of the Joker | 12,671 | 0.24% | 1 | 13:21 |
| 58. | Vectorman | 12,301 | 0.23% | 2 | 36:08 |
| 59. | Adventure Island | 12,029 | 0.22% | 1 | 22:48 |
| 60. | Metal Slug 7 | 10,342 | 0.19% | 1 | 25:32 |
| 61. | Street Fighter 2010: The Final Fight | 10,282 | 0.19% | 1 | 19:11 |
| 62. | Ninja Gaiden | 9,778 | 0.18% | 2 | 28:16 |
| 63. | Rocket Knight Adventures | 9,677 | 0.18% | 1 | 34:55 |
| 64. | Monster Party | 8,985 | 0.17% | 1 | 15:37 |
| 65. | DuckTales | 8,925 | 0.17% | 3 | 28:26 |
| 66. | Chakan: The Forever Man | 8,834 | 0.17% | 1 | 13:34 |
| 67. | Power Blade 2 | 8,410 | 0.16% | 2 | 32:31 |
| 68. | Toy Story | 8,197 | 0.15% | 2 | 25:41 |
| 69. | Rockin' Kats | 7,825 | 0.15% | 6 | 39:33 |
| 70. | Wolverine: Adamantium Rage | 7,515 | 0.14% | 1 | 11:08 |
| 71. | Clash at Demonhead | 7,171 | 0.13% | 1 | 20:11 |
| 72. | Super Turrican | 6,972 | 0.13% | 1 | 10:17 |
| 73. | Speedy Gonzales: Los Gatos Bandidos | 6,722 | 0.13% | 2 | 1:02:17 |
| 74. | U.N. Squadron | 6,387 | 0.12% | 1 | 53:45 |
| 75. | Mega Man 2 | 6,351 | 0.12% | 2 | 30:52 |
| 76. | RoboCop Versus The Terminator | 5,597 | 0.10% | 4 | 2:45:46 |
| 77. | Ultimate Mortal Kombat 3 | 5,572 | 0.10% | 1 | 16:50 |
| 78. | Sonic the Hedgehog | 5,388 | 0.10% | 2 | 30:38 |
| 79. | Castle of Illusion Starring Mickey Mouse | 5,367 | 0.10% | 1 | 14:54 |
| 80. | Alien Hominid | 5,358 | 0.10% | 1 | 18:39 |
| 81. | Super Castlevania IV | 5,183 | 0.10% | 3 | 2:02:52 |
| 82. | High Seas Havoc | 5,095 | 0.10% | 2 | 45:14 |
| 83. | Strider | 4,890 | 0.09% | 1 | 6:43 |
| 84. | Ranger X | 4,741 | 0.09% | 1 | 11:23 |
| 85. | Contra 4 | 4,731 | 0.09% | 4 | 1:00:07 |
| 86. | Langrisser (Warsong) | 4,552 | 0.09% | 1 | 2:39:46 |
| 87. | Maui Mallard in Cold Shadow | 4,535 | 0.08% | 2 | 23:15 |
| 88. | Vegas Stakes | 4,300 | 0.08% | 1 | 4:12 |
| 89. | Pitfall: The Mayan Adventure | 4,194 | 0.08% | 1 | 17:18 |
| 90. | Wolverine | 4,141 | 0.08% | 1 | 9:16 |
| 91. | Mega Turrican | 4,114 | 0.08% | 1 | 16:58 |
| 92. | American Gladiators | 4,043 | 0.08% | 1 | 19:48 |
| 93. | Ufouria: The Saga | 3,759 | 0.07% | 2 | 1:12:26 |
| 94. | James Bond Jr. | 3,606 | 0.07% | 5 | 41:00 |
| 95. | Ninja Gaiden II: The Dark Sword of Chaos | 3,416 | 0.06% | 1 | 17:06 |
| 96. | Low G Man: The Low Gravity Man | 3,384 | 0.06% | 1 | 14:52 |
| 97. | Battle Kid: Fortress of Peril | 3,381 | 0.06% | 2 | 1:56:28 |
| 98. | Mega Man: The Wily Wars | 3,267 | 0.06% | 1 | 12:53 |
| 99. | Sorcerer's Kingdom | 3,229 | 0.06% | 1 | 1:05:26 |
| 100. | Solar Jetman | 3,222 | 0.06% | 1 | 17:29 |
