| 1. | Advance Wars 2: Black Hole Rising | 8,646 | 4.22% | 91 | 4:03:07:21 |
| 2. | Mischief Makers | 3,917 | 1.91% | 53 | 3:54:35 |
| 3. | Metal Saga | 3,532 | 1.72% | 38 | 1:09:15:37 |
| 4. | Metal Gear Rising: Revengeance | 3,025 | 1.47% | 1 | 2:38 |
| 5. | Sonic CD | 2,615 | 1.28% | 1 | 1:00 |
| 6. | Suikoden III | 1,876 | 0.91% | 53 | 1:18:46:23 |
| 7. | Fire Emblem: Radiant Dawn | 1,836 | 0.90% | 43 | 2:01:24:41 |
| 8. | Metal Max 2 Reloaded | 1,727 | 0.84% | 22 | 4:15:34:05 |
| 9. | Advance Wars: Days of Ruin | 1,536 | 0.75% | 60 | 1:22:08:47 |
| 10. | Super Mario World 2: Yoshi's Island | 1,481 | 0.72% | 49 | 7:45:33 |
| 11. | Mystical Ninja Starring Goemon | 1,443 | 0.70% | 15 | 8:57:27 |
| 12. | Sonic Adventure 2 | 1,386 | 0.68% | 1 | 0:07 |
| 13. | Front Mission 3 | 1,058 | 0.52% | 130 | 2:11:12:53 |
| 14. | Metroid Dread | 1,026 | 0.50% | 12 | 17:01:11 |
| 15. | Lotus Land Story | 1,008 | 0.49% | 1 | 3:39 |
| 16. | Metal Max 3 | 990 | 0.48% | 22 | 2:12:01:41 |
| 17. | Buck Bumble | 922 | 0.45% | 1 | 2:37 |
| 18. | Custom Robo | 831 | 0.41% | 29 | 6:16:33 |
| 19. | Metal Max Returns | 816 | 0.40% | 19 | 1:04:32:00 |
| 20. | Barkley, Shut Up and Jam: Gaiden | 803 | 0.39% | 1 | 3:52 |
| 21. | Paper Mario | 798 | 0.39% | 40 | 19:10:38 |
| 22. | The Lord of the Rings: The Third Age | 769 | 0.37% | 32 | 23:39:26 |
| 23. | Metal Slug | 602 | 0.29% | 11 | 3:55:36 |
| 24. | Soulcalibur II | 495 | 0.24% | 23 | 13:03:00 |
| 25. | Super Metroid | 471 | 0.23% | 14 | 5:17:51 |
| 26. | Metal Wolf Chaos XD | 469 | 0.23% | 10 | 4:05:23 |
| 27. | Wario Land: Shake It! | 439 | 0.21% | 27 | 3:43:59 |
| 28. | Etrian Odyssey Nexus | 422 | 0.21% | 44 | 2:11:40:02 |
| 29. | Mega Man X: Command Mission | 420 | 0.20% | 24 | 1:08:27:21 |
| 30. | Retro Game Challenge | 403 | 0.20% | 9 | 10:17:46 |
| 31. | Etrian Odyssey 2 Untold: The Fafnir Knight | 397 | 0.19% | 39 | 3:05:00:29 |
| 32. | Monster Tale | 396 | 0.19% | 16 | 14:14:34 |
| 33. | Metal Gear Solid: Peace Walker | 391 | 0.19% | 37 | 1:06:48:52 |
| 34. | Front Mission 4 | 381 | 0.19% | 32 | 2:04:11:55 |
| 35. | Etrian Odyssey Untold: The Millennium Girl | 367 | 0.18% | 46 | 3:06:59:00 |
| 36. | Epic Battle Fantasy 5 | 353 | 0.17% | 10 | 1:23:32:03 |
| 37. | Guitar Hero | 345 | 0.17% | 7 | 2:34:55 |
| 38. | Jeanne d'Arc | 340 | 0.17% | 34 | 1:13:59:45 |
| 39. | Advance Wars: Dual Strike | 340 | 0.17% | 28 | 1:01:00:51 |
| 40. | Front Mission Series: Gun Hazard | 335 | 0.16% | 13 | 14:36:15 |
| 41. | Mega Man Legends 2 | 334 | 0.16% | 14 | 10:55:21 |
| 42. | AM2R | 311 | 0.15% | 22 | 4:05:50 |
| 43. | Mega Man X3 | 307 | 0.15% | 15 | 2:52:45 |
| 44. | Front Mission | 305 | 0.15% | 62 | 2:05:12:28 |
| 45. | The Incredible Hulk: Ultimate Destruction | 303 | 0.15% | 11 | 10:37:59 |
| 46. | Mega Man X4 | 299 | 0.15% | 31 | 5:05:13 |
| 47. | Magical Starsign | 294 | 0.14% | 20 | 1:00:03:50 |
| 48. | Shovel Knight | 294 | 0.14% | 14 | 5:04:57 |
| 49. | Star Fox Adventures | 285 | 0.14% | 13 | 13:29:20 |
| 50. | Silent Hill 4: The Room | 283 | 0.14% | 1 | 6:19 |
| 51. | Space Station: Silicon Valley | 281 | 0.14% | 16 | 3:55:06 |
| 52. | Mega Man X8 | 245 | 0.12% | 25 | 4:42:56 |
| 53. | Kirby Star Allies | 234 | 0.11% | 40 | 8:00:14 |
| 54. | Mega Man X | 223 | 0.11% | 57 | 1:01:37:44 |
| 55. | Glover | 221 | 0.11% | 19 | 6:05:56 |
| 56. | Tales of Symphonia | 219 | 0.11% | 41 | 1:15:31:32 |
| 57. | Scribblenauts Unlimited | 217 | 0.11% | 3 | 5:21:41 |
| 58. | Etrian Odyssey IV | 213 | 0.10% | 32 | 2:13:33:36 |
| 59. | Etrian Odyssey V | 210 | 0.10% | 30 | 1:23:01:04 |
| 60. | Metroid Prime 3: Corruption | 204 | 0.10% | 22 | 16:35:11 |
| 61. | Metroid Fusion | 203 | 0.10% | 28 | 5:37:48 |
| 62. | Eternal Poison | 200 | 0.10% | 20 | 21:32:59 |
| 63. | Front Mission 5: Scars of the War | 180 | 0.09% | 27 | 1:09:41:48 |
| 64. | Suikoden II | 178 | 0.09% | 38 | 1:05:30:07 |
| 65. | Pokémon XD: Gale of Darkness | 174 | 0.08% | 27 | 1:09:13:02 |
| 66. | Dragon Quest V: Hand of the Heavenly Bride | 172 | 0.08% | 12 | 2:04:16:42 |
| 67. | Dragon Quest VI: Realms of Revelation | 168 | 0.08% | 22 | 1:23:38:45 |
| 68. | Final Fantasy IX | 159 | 0.08% | 59 | 1:18:53:34 |
| 69. | Chameleon Twist | 158 | 0.08% | 9 | 2:17:04 |
| 70. | Lucienne's Quest | 154 | 0.08% | 14 | 13:12:08 |
| 71. | Mother 3 | 153 | 0.07% | 26 | 1:00:13:49 |
| 72. | Etrian Odyssey III | 152 | 0.07% | 29 | 3:05:49:26 |
| 73. | Puzzle Bobble 2 | 150 | 0.07% | 1 | 45:33 |
| 74. | Kirby 64: The Crystal Shards | 149 | 0.07% | 6 | 2:56:44 |
| 75. | Code Name: S.T.E.A.M. | 139 | 0.07% | 16 | 1:01:14:51 |
| 76. | Chameleon Twist 2 | 138 | 0.07% | 6 | 1:58:01 |
| 77. | The Legend of Zelda: A Link Between Worlds | 133 | 0.06% | 13 | 12:44:55 |
| 78. | Wargroove | 129 | 0.06% | 44 | 1:21:32:43 |
| 79. | Klonoa: Door to Phantomile | 125 | 0.06% | 13 | 3:49:39 |
| 80. | Stella Glow | 120 | 0.06% | 40 | 2:05:41:03 |
| 81. | Virtua Quest | 117 | 0.06% | 9 | 14:10:59 |
| 82. | UnMetal | 113 | 0.06% | 10 | 9:18:06 |
| 83. | Advance Wars | 112 | 0.05% | 21 | 16:23:55 |
| 84. | Far Cry 5 | 108 | 0.05% | 1 | 2:55 |
| 85. | Bomberman Hero | 107 | 0.05% | 13 | 6:39:46 |
| 86. | Dragon Quest IV: Chapters of the Chosen | 103 | 0.05% | 21 | 1:19:56:39 |
| 87. | Labyrinth of Touhou 2 | 102 | 0.05% | 12 | 18:01:19 |
| 88. | Paper Mario: The Thousand-Year Door | 99 | 0.05% | 32 | 1:07:45:27 |
| 89. | Dragon Quest | 97 | 0.05% | 12 | 2:05:21 |
| 90. | Bloodstained: Ritual of the Night | 97 | 0.05% | 35 | 1:01:05:45 |
| 91. | Super Mario RPG | 97 | 0.05% | 15 | 18:54:01 |
| 92. | Guardian's Crusade | 94 | 0.05% | 17 | 19:15:58 |
| 93. | Castlevania: Symphony of the Night | 85 | 0.04% | 20 | 8:15:20 |
| 94. | Dark Souls | 85 | 0.04% | 1 | 0:02 |
| 95. | The Legend of Zelda: The Minish Cap | 84 | 0.04% | 12 | 12:49:47 |
| 96. | Pokémon Platinum | 81 | 0.04% | 20 | 1:16:47:10 |
| 97. | Turok: Dinosaur Hunter | 80 | 0.04% | 23 | 9:13:33 |
| 98. | Mega Man Maverick Hunter X | 79 | 0.04% | 26 | 4:54:27 |
| 99. | Chibi-Robo! | 78 | 0.04% | 12 | 9:05:57 |
| 100. | Shining Force III | 76 | 0.04% | 16 | 19:05:51 |
