| 1. | The Legend of Zelda: Ocarina of Time | 3,829,411 | 44.95% | 87 | 19:44:12 |
| 2. | The Legend of Zelda: Majora's Mask | 2,483,381 | 29.15% | 59 | 10:15:44 |
| 3. | Paper Mario: The Thousand-Year Door | 752,113 | 8.83% | 47 | 7:44:09 |
| 4. | The Legend of Zelda: The Wind Waker | 212,758 | 2.50% | 59 | 10:59:06 |
| 5. | Dragon Quest Heroes: Rocket Slime | 163,873 | 1.92% | 9 | 2:57:28 |
| 6. | Yu-Gi-Oh! GX Tag Force 3 | 73,747 | 0.87% | 17 | 12:56:32 |
| 7. | Yu-Gi-Oh! 5D's: Tag Force 4 | 70,672 | 0.83% | 37 | 22:38:42 |
| 8. | Yu-Gi-Oh! 5D's: Tag Force 6 | 57,416 | 0.67% | 27 | 1:03:20:28 |
| 9. | Yu-Gi-Oh! GX Tag Force | 56,913 | 0.67% | 13 | 10:14:49 |
| 10. | Mega Man Battle Network 5 | 56,678 | 0.67% | 16 | 8:29:31 |
| 11. | Yu-Gi-Oh! The Falsebound Kingdom | 54,227 | 0.64% | 39 | 4:48:24 |
| 12. | Tomato Adventure | 50,072 | 0.59% | 3 | 4:45:03 |
| 13. | Yu-Gi-Oh! 5D's: Tag Force 5 | 49,048 | 0.58% | 23 | 1:05:31:51 |
| 14. | Yu-Gi-Oh! GX Tag Force 2 | 38,669 | 0.45% | 17 | 13:36:54 |
| 15. | Mega Man Battle Network | 37,887 | 0.44% | 45 | 18:12:22 |
| 16. | Paper Mario | 37,181 | 0.44% | 18 | 4:54:59 |
| 17. | Mega Man | 28,391 | 0.33% | 38 | 3:42:39 |
| 18. | Yu-Gi-Oh! Arc-V Tag Force Special | 22,967 | 0.27% | 18 | 14:19:18 |
| 19. | Duel Masters Nettou! Battle Arena | 19,244 | 0.23% | 24 | 1:05:58:45 |
| 20. | Brave Story: New Traveler | 16,989 | 0.20% | 36 | 15:23:04 |
| 21. | Fortune Street | 15,254 | 0.18% | 18 | 1:01:10:14 |
| 22. | Mario Kart 7 | 14,728 | 0.17% | 7 | 1:27:11 |
| 23. | Pokémon Platinum | 13,264 | 0.16% | 2 | 46:31 |
| 24. | Double Dragon Advance | 11,732 | 0.14% | 1 | 26:06 |
| 25. | Itadaki Street Portable | 10,044 | 0.12% | 16 | 14:18:54 |
| 26. | Mushiking: The King of Beetles | 7,881 | 0.09% | 14 | 17:38:29 |
| 27. | Itadaki Street DS | 7,879 | 0.09% | 14 | 11:56:21 |
| 28. | Pokémon Emerald | 4,589 | 0.05% | 3 | 2:20:35 |
| 29. | Xenoblade Chronicles 3 | 4,001 | 0.05% | 4 | 4:12:53 |
| 30. | Pokémon FireRed and LeafGreen | 3,771 | 0.04% | 7 | 2:25:11 |
| 31. | The Legend of Zelda: Echoes of Wisdom | 3,591 | 0.04% | 12 | 0:00 |
| 32. | Super Mario 3D Land | 2,460 | 0.03% | 5 | 0:00 |
| 33. | Itadaki Street: Watashi no Omise ni Yottette | 1,910 | 0.02% | 5 | 4:55:33 |
| 34. | King's Raid | 1,853 | 0.02% | 7 | 8:07:38 |
| 35. | Gods Eater Burst | 1,839 | 0.02% | 13 | 0:00 |
| 36. | Final Fantasy XII | 624 | 0.01% | 1 | 1:03:41 |
| 37. | God Eater | 494 | 0.01% | 2 | 0:00 |
| 38. | Growlanser: Wayfarer of Time | 448 | 0.01% | 1 | 6:10 |
| 39. | Shadowverse | 213 | 0.00% | 2 | 0:00 |
| 40. | Growlanser | 185 | 0.00% | 1 | 6:42 |
