| 1. | The Legend of Zelda: Majora's Mask | 766,761 | 35.46% | 7 | 37:15 |
| 2. | The Legend of Zelda: Ocarina of Time | 420,542 | 19.45% | 8 | 46:03 |
| 3. | Dragon Quest V: Hand of the Heavenly Bride | 243,335 | 11.25% | 5 | 54:02 |
| 4. | Final Fantasy V | 183,698 | 8.50% | 27 | 4:02:26 |
| 5. | Final Fantasy | 89,118 | 4.12% | 49 | 8:37:43 |
| 6. | Bahamut Lagoon | 88,828 | 4.11% | 53 | 1:07:09:45 |
| 7. | Donkey Kong Country | 18,265 | 0.84% | 2 | 4:19 |
| 8. | Harukanaru Toki no Naka de 3 | 13,091 | 0.61% | 3 | 30:02 |
| 9. | TalesWeaver | 12,003 | 0.56% | 7 | 4:04:51 |
| 10. | Dragon Quest III: The Seeds of Salvation | 4,697 | 0.22% | 28 | 6:46:23 |
| 11. | Final Fantasy VI | 3,539 | 0.16% | 24 | 4:01:42 |
| 12. | SaGa Frontier | 2,917 | 0.13% | 4 | 19:17 |
| 13. | Romancing SaGa 3 | 2,896 | 0.13% | 1 | 3:41 |
| 14. | Final Fantasy III | 2,785 | 0.13% | 15 | 1:45:16 |
| 15. | Space Harrier II | 2,131 | 0.10% | 2 | 36:09 |
| 16. | Mega Man 7 | 1,741 | 0.08% | 2 | 6:27 |
| 17. | Final Fantasy IV: The After Years | 1,506 | 0.07% | 9 | 1:20:04 |
| 18. | Phantasy Star Online 2 | 1,147 | 0.05% | 3 | 32:50 |
| 19. | Mega Man 2 | 1,099 | 0.05% | 5 | 1:29:11 |
| 20. | Mega Man 3 | 492 | 0.02% | 5 | 2:12:16 |
| 21. | E.V.O.: Search for Eden | 383 | 0.02% | 8 | 2:45:20 |
| 22. | The Treasures of Montezuma 2 | 321 | 0.01% | 1 | 3:33 |
| 23. | Tetris | 294 | 0.01% | 1 | 11:32 |
| 24. | Doodle Champion Island Games | 270 | 0.01% | 1 | 15:11 |
| 25. | Super Mario Bros. 3 | 259 | 0.01% | 8 | 4:43:15 |
| 26. | I Wanna Be the Guy | 216 | 0.01% | 16 | 2:30:09 |
| 27. | Mega Man 5 | 215 | 0.01% | 5 | 2:29:48 |
| 28. | R-Type | 213 | 0.01% | 1 | 30:05 |
| 29. | StepMania | 208 | 0.01% | 4 | 19:14 |
| 30. | Challenger | 151 | 0.01% | 2 | 5:11 |
| 31. | Dragon Quest VIII: The Journey of the Cursed King | 143 | 0.01% | 5 | 1:35:20 |
| 32. | Mario Kart DS | 138 | 0.01% | 1 | 2:44 |
| 33. | Minecraft | 137 | 0.01% | 9 | 1:20:28 |
| 34. | F-Zero | 124 | 0.01% | 1 | 19:49 |
| 35. | Inferno | 104 | 0.00% | 3 | 22:14 |
| 36. | Gradius V | 78 | 0.00% | 1 | 13:03 |
| 37. | Donkey Kong Country 2 | 53 | 0.00% | 1 | 2:31 |
| 38. | Accident | 48 | 0.00% | 1 | 2:37 |
| 39. | Super Ghouls 'n Ghosts | 40 | 0.00% | 1 | 1:26:57 |
| 40. | Sushi Cat | 36 | 0.00% | 1 | 8:34 |
| 41. | Bully | 31 | 0.00% | 1 | 10:32 |
| 42. | Celeste | 28 | 0.00% | 1 | 4:04 |
| 43. | Smalles | 18 | 0.00% | 1 | 3:28 |
