| 1. | Dragon Quest V: Hand of the Heavenly Bride | 1,419,218 | 10.63% | 169 | 1:01:30:54 |
| 2. | Breath of Fire | 1,063,836 | 7.97% | 127 | 23:21:17 |
| 3. | Gaia Saver | 653,650 | 4.90% | 97 | 15:05:56 |
| 4. | The Legend of Zelda: Ocarina of Time | 597,537 | 4.48% | 125 | 19:35:50 |
| 5. | The Legend of Zelda: Link's Awakening | 471,145 | 3.53% | 74 | 11:05:08 |
| 6. | Kirby: Nightmare in Dream Land | 442,981 | 3.32% | 15 | 2:01:29 |
| 7. | Mega Man | 379,491 | 2.84% | 35 | 8:20:25 |
| 8. | Mystery Dungeon: Shiren the Wanderer | 333,180 | 2.50% | 35 | 10:07:05 |
| 9. | Dragon Quest | 308,652 | 2.31% | 86 | 1:20:42:32 |
| 10. | Mega Man 3 | 214,718 | 1.61% | 11 | 1:27:12 |
| 11. | Super Mario Bros. | 210,102 | 1.57% | 13 | 5:49:37 |
| 12. | Parodius! From Myth to Laughter | 185,760 | 1.39% | 6 | 1:18:59 |
| 13. | Final Fight 2 | 126,466 | 0.95% | 7 | 1:06:38 |
| 14. | Final Fight | 97,214 | 0.73% | 6 | 40:59 |
| 15. | Dragon Quest III: The Seeds of Salvation | 79,548 | 0.60% | 22 | 12:18:39 |
| 16. | Ultraman: Towards the Future | 78,760 | 0.59% | 5 | 1:12:32 |
| 17. | Ninja Jajamaru-kun | 77,951 | 0.58% | 3 | 22:19 |
| 18. | Mega Man 2 | 72,915 | 0.55% | 13 | 1:26:21 |
| 19. | SD the Great Battle | 72,909 | 0.55% | 2 | 14:10 |
| 20. | Kirby's Dream Land | 60,916 | 0.46% | 2 | 13:17 |
| 21. | Dragon Power | 54,626 | 0.41% | 6 | 46:55 |
| 22. | Hoshi Wo Miru Hito | 52,867 | 0.40% | 1 | 10:40 |
| 23. | Spelunker | 49,701 | 0.37% | 9 | 1:39:02 |
| 24. | Super Mario Bros. 3 | 48,622 | 0.36% | 8 | 3:00:07 |
| 25. | Salamander | 48,576 | 0.36% | 2 | 18:34 |
| 26. | Earthbound | 48,538 | 0.36% | 62 | 22:56:21 |
| 27. | Ninja Kid | 41,618 | 0.31% | 2 | 18:10 |
| 28. | Pokémon Emerald | 34,845 | 0.26% | 44 | 1:23:21:44 |
| 29. | Final Fantasy V | 34,832 | 0.26% | 48 | 1:04:38:09 |
| 30. | JaJaMaru no Daibouken | 32,420 | 0.24% | 3 | 26:39 |
| 31. | Super Robot Wars: Original Generations | 31,909 | 0.24% | 57 | 3:06:48:41 |
| 32. | Landstalker | 29,127 | 0.22% | 30 | 13:23:05 |
| 33. | Kung-Fu Master | 27,284 | 0.20% | 2 | 13:21 |
| 34. | Donkey Kong | 27,226 | 0.20% | 1 | 10:56 |
| 35. | Hammerin' Harry | 26,772 | 0.20% | 2 | 21:02 |
| 36. | Castlevania | 24,414 | 0.18% | 2 | 17:02 |
| 37. | Kirby's Dream Land 2 | 22,957 | 0.17% | 5 | 3:00:24 |
| 38. | Ice Climber | 21,920 | 0.16% | 1 | 6:58 |
| 39. | The Great Battle IV | 21,565 | 0.16% | 1 | 6:43 |
| 40. | Breath of Fire II | 21,302 | 0.16% | 35 | 1:04:44:49 |
| 41. | Yie Ar Kung-Fu | 20,950 | 0.16% | 3 | 23:34 |
| 42. | The Great Battle V | 20,232 | 0.15% | 1 | 9:23 |
| 43. | Pac-Man | 20,220 | 0.15% | 7 | 1:04:16 |
| 44. | Mother 3 | 19,503 | 0.15% | 69 | 23:59:25 |
| 45. | The Great Battle III | 18,537 | 0.14% | 1 | 5:01 |
| 46. | Atlantis no Nazo | 17,520 | 0.13% | 1 | 15:00 |
| 47. | Romancing SaGa | 16,228 | 0.12% | 127 | 2:13:21:18 |
| 48. | Mighty Bomb Jack | 14,860 | 0.11% | 1 | 8:36 |
| 49. | Lode Runner | 14,651 | 0.11% | 3 | 1:10:59 |
| 50. | Pooyan | 13,931 | 0.10% | 1 | 10:14 |
| 51. | Star Soldier | 12,286 | 0.09% | 2 | 12:17 |
| 52. | Dragon Ball 3: Gokuden | 11,055 | 0.08% | 9 | 5:28:05 |
| 53. | Dragon Ball Z: Kyoushuu! Saiyajin | 10,760 | 0.08% | 13 | 7:37:40 |
| 54. | Sasa | 10,624 | 0.08% | 2 | 14:46 |
| 55. | Chrono Trigger | 9,466 | 0.07% | 59 | 1:13:41:47 |
| 56. | Ghosts 'n Goblins | 9,408 | 0.07% | 13 | 5:48:15 |
| 57. | Mario Kart Wii | 9,366 | 0.07% | 32 | 8:31:15 |
| 58. | Gakkou de atta Kowai Hanashi | 9,329 | 0.07% | 6 | 7:46:25 |
| 59. | Final Fantasy III | 8,301 | 0.06% | 18 | 17:33:02 |
| 60. | Doraemon Kimi to Pet no Monogatari | 7,964 | 0.06% | 10 | 9:10:43 |
| 61. | Daikaijuu Monogatari II | 7,902 | 0.06% | 42 | 1:14:53:40 |
| 62. | Final Fight 3 | 7,701 | 0.06% | 1 | 6:16 |
| 63. | Shin Megami Tensei | 7,531 | 0.06% | 70 | 1:18:08:57 |
| 64. | Dragon Quest IV: Chapters of the Chosen | 7,165 | 0.05% | 3 | 1:00:44:29 |
| 65. | Mega Man: Dr. Wily's Revenge | 6,971 | 0.05% | 1 | 1:54:35 |
| 66. | Dragon Ball Z Side Story: Plan to Eradicate the Saiyans | 6,728 | 0.05% | 17 | 8:31:00 |
| 67. | Street Fighter II | 6,714 | 0.05% | 2 | 29:23 |
| 68. | Dragon Quest II: Luminaries of the Legendary Line | 6,538 | 0.05% | 3 | 19:48:14 |
| 69. | Tales of Phantasia | 6,531 | 0.05% | 44 | 1:07:38:08 |
| 70. | Castlevania II: Simon's Quest | 6,509 | 0.05% | 1 | 4:41 |
| 71. | Minecraft | 6,467 | 0.05% | 18 | 15:50:42 |
| 72. | Onimusha: Warlords | 6,235 | 0.05% | 13 | 4:42:46 |
| 73. | Seicross | 5,157 | 0.04% | 2 | 20:41 |
| 74. | Dragon Ball Z III: Ressen Jinzou Ningen | 4,954 | 0.04% | 10 | 4:19:45 |
| 75. | Dragon Ball Z: Super Saiya Densetsu | 4,925 | 0.04% | 8 | 4:56:13 |
| 76. | Prince of Persia | 4,903 | 0.04% | 9 | 2:53:25 |
| 77. | Dragon Ball Z II: Gekishin Freeza!! | 4,871 | 0.04% | 16 | 6:04:35 |
| 78. | Super Ninja Boy | 4,740 | 0.04% | 12 | 9:33:23 |
| 79. | Pole's Big Adventure | 3,789 | 0.03% | 6 | 2:44:50 |
| 80. | Secret of Mana | 3,541 | 0.03% | 29 | 16:28:48 |
| 81. | Donald Land | 3,478 | 0.03% | 3 | 1:08:04 |
| 82. | Little Ninja Brothers | 3,369 | 0.03% | 9 | 7:37:24 |
| 83. | Super Chinese World 3 | 3,338 | 0.03% | 11 | 7:47:41 |
| 84. | Lufia II: Rise of the Sinistrals | 3,275 | 0.02% | 53 | 1:09:13:15 |
| 85. | Kirby Super Star | 2,845 | 0.02% | 8 | 4:10:00 |
| 86. | Robbit Mon Dieu | 2,791 | 0.02% | 16 | 10:30:01 |
| 87. | Ninja Gaiden II: The Dark Sword of Chaos | 2,739 | 0.02% | 3 | 1:12:19 |
| 88. | Super Chinese World 2 | 2,620 | 0.02% | 8 | 6:01:56 |
| 89. | Super Chinese 3 | 2,493 | 0.02% | 10 | 8:56:18 |
| 90. | Treasure Hunter G | 2,366 | 0.02% | 34 | 22:00:06 |
| 91. | Renegade | 2,355 | 0.02% | 1 | 22:20 |
| 92. | Crayon Shin-Chan: Ora to Poi Poi | 2,128 | 0.02% | 1 | 32:59 |
| 93. | Samurai Shodown III | 2,058 | 0.02% | 1 | 52:50 |
| 94. | Mega Man 5 | 2,042 | 0.02% | 11 | 2:35:17 |
| 95. | Super Robot Taisen: Original Generation | 2,037 | 0.02% | 4 | 8:29:12 |
| 96. | Double Dragon | 1,976 | 0.01% | 1 | 29:18 |
| 97. | Baltron | 1,725 | 0.01% | 1 | 16:13 |
| 98. | Pinball | 1,497 | 0.01% | 1 | 10:09 |
| 99. | Dragon Quest VI: Realms of Revelation | 1,488 | 0.01% | 10 | 5:35:24 |
| 100. | Dr. Mario | 1,170 | 0.01% | 1 | 33:43 |
