| 1. | Metal Gear Solid | 29,304 | 0.76% | 34 | 5:30:30 |
| 2. | Donald Duck: Goin' Quackers | 21,296 | 0.55% | 7 | 1:33:11 |
| 3. | Mega Man 8 | 17,104 | 0.45% | 12 | 1:55:40 |
| 4. | Kim Possible 3: Team Possible | 16,965 | 0.44% | 7 | 1:34:03 |
| 5. | The Legend of Zelda: Ocarina of Time | 16,666 | 0.43% | 56 | 9:37:50 |
| 6. | Mega Man Battle Network 2 | 14,911 | 0.39% | 38 | 6:35:02 |
| 7. | The Fairly OddParents: Shadow Showdown | 14,558 | 0.38% | 6 | 1:31:29 |
| 8. | The Fairly OddParents: Clash with the Anti-World | 8,768 | 0.23% | 4 | 46:45 |
| 9. | Jimmy Neutron vs. Jimmy Negatron | 8,743 | 0.23% | 7 | 1:41:02 |
| 10. | Donkey Kong 64 | 7,487 | 0.20% | 50 | 12:11:02 |
| 11. | Batman Beyond: Return of the Joker | 6,471 | 0.17% | 3 | 44:16 |
| 12. | Pinky and the Brain: The Master Plan | 6,358 | 0.17% | 2 | 1:12:35 |
| 13. | Mega Man Battle Network 3 | 6,091 | 0.16% | 51 | 8:52:31 |
| 14. | Tiny Toon Adventures: Dizzy's Candy Quest | 5,722 | 0.15% | 4 | 47:32 |
| 15. | Final Fantasy Crystal Chronicles: Ring of Fates | 5,649 | 0.15% | 18 | 4:15:04 |
| 16. | Jake Hunter Detective Story: Memories of the Past | 5,626 | 0.15% | 11 | 7:55:47 |
| 17. | Disney's Pinocchio | 5,201 | 0.14% | 2 | 17:37 |
| 18. | Spyro Orange: The Cortex Conspiracy | 4,898 | 0.13% | 8 | 1:52:47 |
| 19. | Mega Man | 4,391 | 0.11% | 19 | 4:10:37 |
| 20. | Bomberman Hero | 3,899 | 0.10% | 27 | 4:37:42 |
| 21. | Mega Man Battle Network | 3,848 | 0.10% | 20 | 3:25:16 |
| 22. | Another Code: Two Memories | 3,149 | 0.08% | 4 | 3:49:55 |
| 23. | Spyro: Attack of the Rhynocs | 2,870 | 0.07% | 17 | 4:12:59 |
| 24. | Mega Man 5 | 2,740 | 0.07% | 16 | 2:56:34 |
| 25. | Marvel Super Heroes | 2,567 | 0.07% | 2 | 24:17 |
| 26. | Bugs Bunny: Lost in Time | 2,544 | 0.07% | 14 | 5:09:06 |
| 27. | Shaman King: Master of Spirits | 2,194 | 0.06% | 5 | 3:42:05 |
| 28. | Sonic the Hedgehog | 2,146 | 0.06% | 19 | 6:51:10 |
| 29. | Mega Man Legends 2 | 1,993 | 0.05% | 8 | 6:38:14 |
| 30. | Snow Bros. | 1,912 | 0.05% | 1 | 37:24 |
| 31. | Jimmy Neutron: Boy Genius | 1,911 | 0.05% | 8 | 1:53:23 |
| 32. | Ristar | 1,902 | 0.05% | 8 | 1:46:17 |
| 33. | Mega Man Star Force | 1,836 | 0.05% | 16 | 13:03:16 |
| 34. | Animaniacs | 1,647 | 0.04% | 4 | 1:20:50 |
| 35. | Disney's Kim Possible 2: Drakken's Demise | 1,633 | 0.04% | 5 | 1:08:28 |
| 36. | Shaman King: Master of Spirits 2 | 1,588 | 0.04% | 4 | 3:29:05 |
| 37. | Crash Bandicoot Purple: Ripto's Rampage | 1,557 | 0.04% | 5 | 1:15:08 |
| 38. | Scurge: Hive | 1,534 | 0.04% | 8 | 4:29:38 |
| 39. | Metal Slug 6 | 1,514 | 0.04% | 4 | 59:37 |
| 40. | Harry Potter and the Chamber of Secrets | 1,329 | 0.03% | 8 | 2:01:16 |
| 41. | Spyro 2: Season of Flame | 1,272 | 0.03% | 13 | 3:03:18 |
| 42. | Donald Duck Advance | 1,247 | 0.03% | 3 | 44:22 |
| 43. | Sonic Chronicles: The Dark Brotherhood | 1,241 | 0.03% | 5 | 3:39:57 |
| 44. | Kirby: Nightmare in Dream Land | 1,159 | 0.03% | 9 | 1:28:18 |
| 45. | Mega Man 6 | 1,158 | 0.03% | 14 | 2:49:30 |
| 46. | Mega Man Star Force 2 | 1,052 | 0.03% | 11 | 8:58:41 |
| 47. | Mega Man 4 | 1,027 | 0.03% | 15 | 2:57:17 |
| 48. | Disney's Kim Possible: Revenge of Monkey Fist | 1,003 | 0.03% | 3 | 34:06 |
| 49. | Mega Man ZX Advent | 957 | 0.02% | 14 | 11:03:37 |
| 50. | The Misadventures of Tron Bonne | 925 | 0.02% | 6 | 3:10:26 |
| 51. | Chrono Trigger | 911 | 0.02% | 26 | 18:21:27 |
| 52. | Sonic Advance 3 | 902 | 0.02% | 10 | 1:40:40 |
| 53. | Panzer Bandit | 841 | 0.02% | 4 | 39:47 |
| 54. | Donkey Kong Country 3 | 836 | 0.02% | 7 | 3:55:02 |
| 55. | Mickey's Ultimate Challenge | 772 | 0.02% | 2 | 26:07 |
| 56. | Final Fantasy Crystal Chronicles: Echoes of Time | 764 | 0.02% | 17 | 4:14:22 |
| 57. | Summon Night: Swordcraft Story 2 | 750 | 0.02% | 8 | 6:43:00 |
| 58. | The Adventures of Jimmy Neutron Boy Genius: Jet Fusion | 748 | 0.02% | 9 | 2:03:39 |
| 59. | Mega Man X4 | 720 | 0.02% | 13 | 1:48:43 |
| 60. | Castlevania: Portrait of Ruin | 699 | 0.02% | 5 | 4:29:38 |
| 61. | Blaster Master: Blasting Again | 697 | 0.02% | 15 | 6:49:48 |
| 62. | Harry Potter and the Philosopher's Stone | 683 | 0.02% | 9 | 2:06:50 |
| 63. | Chester Cheetah: Too Cool to Fool | 653 | 0.02% | 1 | 20:32 |
| 64. | Super Mario World | 647 | 0.02% | 3 | 44:56 |
| 65. | Mega Man & Bass | 629 | 0.02% | 12 | 1:49:23 |
| 66. | Spyro: Season of Ice | 626 | 0.02% | 15 | 3:39:42 |
| 67. | Yoshi's Island DS | 618 | 0.02% | 5 | 4:14:19 |
| 68. | Disney's Magical Quest 3 starring Mickey and Donald | 575 | 0.01% | 5 | 1:05:06 |
| 69. | Star Fox 64 | 562 | 0.01% | 8 | 1:10:31 |
| 70. | Super Tempo | 555 | 0.01% | 7 | 1:37:52 |
| 71. | Addams Family Values | 531 | 0.01% | 4 | 3:27:46 |
| 72. | Mega Man Star Force 3 | 531 | 0.01% | 11 | 9:35:52 |
| 73. | Solatorobo: Red the Hunter | 522 | 0.01% | 18 | 15:42:19 |
| 74. | The Fairly OddParents! Enter the Cleft | 516 | 0.01% | 2 | 30:21 |
| 75. | Klonoa: Door to Phantomile | 515 | 0.01% | 18 | 3:01:56 |
| 76. | Sonic the Hedgehog: Triple Trouble | 501 | 0.01% | 7 | 1:04:59 |
| 77. | Kirby: Canvas Curse | 498 | 0.01% | 5 | 4:06:57 |
| 78. | Sonic Advance 2 | 493 | 0.01% | 6 | 59:40 |
| 79. | Kaeru no Tame ni Kane wa Naru | 492 | 0.01% | 4 | 2:16:18 |
| 80. | WarioWare: Twisted! | 490 | 0.01% | 1 | 54:48 |
| 81. | Mega Man Legends | 479 | 0.01% | 6 | 5:14:22 |
| 82. | Cadillacs and Dinosaurs | 473 | 0.01% | 4 | 49:08 |
| 83. | Mega Man X3 | 441 | 0.01% | 8 | 1:17:41 |
| 84. | Sigma Star Saga | 438 | 0.01% | 8 | 6:28:27 |
| 85. | Kingdom Hearts: Chain of Memories | 438 | 0.01% | 14 | 3:14:15 |
| 86. | Sword of Mana | 422 | 0.01% | 22 | 5:23:27 |
| 87. | Looney Tunes Collector: Alert! | 406 | 0.01% | 5 | 1:05:52 |
| 88. | Crash Bandicoot 2: N-Tranced | 398 | 0.01% | 3 | 1:32:52 |
| 89. | Battletoads/Double Dragon | 389 | 0.01% | 14 | 3:29:53 |
| 90. | Kaze no Klonoa: Moonlight Museum | 385 | 0.01% | 11 | 2:33:41 |
| 91. | Phantasy Star II | 366 | 0.01% | 11 | 4:57:41 |
| 92. | The Embodiment of Scarlet Devil | 362 | 0.01% | 7 | 1:21:53 |
| 93. | Tiny Toon Adventures 2: Montana's Movie Madness | 357 | 0.01% | 4 | 56:55 |
| 94. | Speedy Eggbert | 355 | 0.01% | 3 | 2:16:57 |
| 95. | Klonoa 2: Dream Champ Tournament | 355 | 0.01% | 4 | 3:21:30 |
| 96. | Teenage Mutant Ninja Turtles III: The Manhattan Project | 353 | 0.01% | 9 | 1:28:50 |
| 97. | The Adventures of Jimmy Neutron Boy Genius: Attack of the Twonkies | 340 | 0.01% | 2 | 30:23 |
| 98. | Mega Man X5 | 309 | 0.01% | 3 | 28:48 |
| 99. | ESP Ra.De. | 304 | 0.01% | 6 | 50:23 |
| 100. | The Granstream Saga | 289 | 0.01% | 9 | 8:26:51 |
