| 1. | Final Fantasy V | 29,961 | 1.61% | 174 | 4:13:46 |
| 2. | Final Fantasy VI | 25,959 | 1.39% | 172 | 6:11:49 |
| 3. | Final Fantasy VII | 24,386 | 1.31% | 118 | 4:41:03 |
| 4. | Chrono Trigger | 23,276 | 1.25% | 139 | 4:08:21 |
| 5. | Pokémon Gold and Silver | 21,122 | 1.14% | 112 | 2:34:58 |
| 6. | Pokémon Ruby and Sapphire | 15,445 | 0.83% | 85 | 3:00:45 |
| 7. | Super Smash Bros. Brawl | 15,361 | 0.83% | 27 | 1:00:04 |
| 8. | Dragon Quest III: The Seeds of Salvation | 13,948 | 0.75% | 71 | 1:16:43 |
| 9. | Valkyrie Profile | 13,114 | 0.70% | 65 | 1:44:25 |
| 10. | Dragon Quest IV: Chapters of the Chosen | 11,368 | 0.61% | 63 | 1:30:02 |
| 11. | Pokémon Black and White | 10,858 | 0.58% | 70 | 2:00:26 |
| 12. | Mario Bros. | 10,675 | 0.57% | 27 | 17:09 |
| 13. | Super Mario RPG | 10,384 | 0.56% | 49 | 1:06:10 |
| 14. | Phoenix Wright: Ace Attorney - Justice for All | 10,000 | 0.54% | 18 | 17:21 |
| 15. | Final Fantasy X | 9,963 | 0.54% | 84 | 3:32:41 |
| 16. | Live A Live | 9,058 | 0.49% | 26 | 36:28 |
| 17. | Tales of Destiny 2 | 8,723 | 0.47% | 68 | 1:30:19 |
| 18. | Dragon Quest II: Luminaries of the Legendary Line | 8,634 | 0.46% | 64 | 1:05:54 |
| 19. | Final Fantasy IX | 8,589 | 0.46% | 95 | 3:58:39 |
| 20. | Chrono Cross | 8,482 | 0.46% | 79 | 3:11:33 |
| 21. | Tales of the Abyss | 7,882 | 0.42% | 36 | 50:38 |
| 22. | Phoenix Wright: Ace Attorney | 7,796 | 0.42% | 28 | 47:11 |
| 23. | Umamusume: Pretty Derby | 7,775 | 0.42% | 8 | 18:25 |
| 24. | Tales of Symphonia | 7,720 | 0.41% | 40 | 51:26 |
| 25. | Xenogears | 7,382 | 0.40% | 36 | 1:13:24 |
| 26. | Romancing SaGa 2 | 7,337 | 0.39% | 39 | 53:53 |
| 27. | Tales of Phantasia | 7,111 | 0.38% | 57 | 1:27:05 |
| 28. | Romancing SaGa 3 | 7,104 | 0.38% | 50 | 1:12:05 |
| 29. | Final Fantasy III | 6,906 | 0.37% | 70 | 1:11:05 |
| 30. | Perfect Cherry Blossom | 6,553 | 0.35% | 68 | 2:41:29 |
| 31. | Legend of Mana | 6,197 | 0.33% | 53 | 1:34:33 |
| 32. | Dragon Quest | 6,131 | 0.33% | 63 | 44:02 |
| 33. | The Embodiment of Scarlet Devil | 6,107 | 0.33% | 46 | 1:37:49 |
| 34. | Super Mario Bros. 3 | 5,829 | 0.31% | 40 | 21:46 |
| 35. | Imperishable Night | 5,691 | 0.31% | 72 | 2:45:33 |
| 36. | Super Robot Wars Alpha | 5,623 | 0.30% | 15 | 26:10 |
| 37. | Mega Man 2 | 5,558 | 0.30% | 50 | 54:10 |
| 38. | Final Fantasy VIII | 5,439 | 0.29% | 61 | 2:46:08 |
| 39. | SaGa Frontier | 5,400 | 0.29% | 34 | 1:14:35 |
| 40. | The Legend of Zelda: A Link to the Past | 5,370 | 0.29% | 28 | 36:36 |
| 41. | Pokémon HeartGold and SoulSilver | 5,358 | 0.29% | 38 | 1:08:03 |
| 42. | Trials of Mana | 5,080 | 0.27% | 44 | 1:22:54 |
| 43. | Final Fantasy Legend II | 4,872 | 0.26% | 37 | 31:57 |
| 44. | Final Fantasy IV | 4,864 | 0.26% | 38 | 51:15 |
| 45. | The Legend of Zelda | 4,659 | 0.25% | 41 | 35:34 |
| 46. | Super Mario World | 4,552 | 0.24% | 19 | 14:44 |
| 47. | Dragon Quest VIII: The Journey of the Cursed King | 4,448 | 0.24% | 24 | 50:20 |
| 48. | Dragon Quest VI: Realms of Revelation | 4,320 | 0.23% | 27 | 38:10 |
| 49. | Earthbound | 4,243 | 0.23% | 13 | 17:32 |
| 50. | Pokémon Diamond and Pearl | 4,153 | 0.22% | 27 | 57:41 |
| 51. | Star Ocean: The Second Story | 4,027 | 0.22% | 29 | 54:39 |
| 52. | Kirby Super Star | 3,800 | 0.20% | 21 | 27:17 |
| 53. | The Legend of Zelda: Ocarina of Time | 3,790 | 0.20% | 28 | 36:49 |
| 54. | Dragon Quest V: Hand of the Heavenly Bride | 3,723 | 0.20% | 27 | 34:25 |
| 55. | Dragon Ball Z: Budokai 2 | 3,685 | 0.20% | 16 | 13:07 |
| 56. | Star Ocean: Till the End of Time | 3,672 | 0.20% | 24 | 38:36 |
| 57. | Thanatos | 3,407 | 0.18% | 12 | 26:31 |
| 58. | Fantasy Zone | 3,345 | 0.18% | 54 | 54:30 |
| 59. | Super Smash Bros. Melee | 3,344 | 0.18% | 27 | 29:37 |
| 60. | Mountain of Faith | 3,253 | 0.17% | 40 | 1:52:14 |
| 61. | Melty Blood | 3,143 | 0.17% | 23 | 29:24 |
| 62. | Dragon Quest Monsters | 3,013 | 0.16% | 13 | 20:50 |
| 63. | The Tower of Druaga | 2,901 | 0.16% | 24 | 17:23 |
| 64. | Wild Arms 2 | 2,855 | 0.15% | 23 | 26:42 |
| 65. | Dragon Ball Z: Super Butōden | 2,714 | 0.15% | 8 | 10:36 |
| 66. | SaGa Frontier 2 | 2,670 | 0.14% | 13 | 30:24 |
| 67. | Animal Crossing: Wild World | 2,661 | 0.14% | 9 | 13:32 |
| 68. | The Legend of Heroes: Trails in the Sky | 2,648 | 0.14% | 22 | 55:27 |
| 69. | Kirby's Adventure | 2,512 | 0.13% | 16 | 17:08 |
| 70. | Dragon Quest XI | 2,466 | 0.13% | 6 | 9:26 |
| 71. | Lufia II: Rise of the Sinistrals | 2,456 | 0.13% | 15 | 43:39 |
| 72. | Bahamut Lagoon | 2,454 | 0.13% | 24 | 24:09 |
| 73. | Guilty Gear | 2,452 | 0.13% | 45 | 1:01:24 |
| 74. | Mega Man 5 | 2,423 | 0.13% | 23 | 19:15 |
| 75. | Atelier Ayesha: The Alchemist of Dusk | 2,382 | 0.13% | 11 | 25:11 |
| 76. | Mega Man X | 2,332 | 0.13% | 25 | 29:37 |
| 77. | Final Fantasy II | 2,281 | 0.12% | 35 | 22:56 |
| 78. | Breath of Fire III | 2,252 | 0.12% | 18 | 31:31 |
| 79. | Tales of Eternia | 2,248 | 0.12% | 14 | 18:43 |
| 80. | Mega Man 4 | 2,232 | 0.12% | 26 | 20:49 |
| 81. | Romancing SaGa | 2,210 | 0.12% | 17 | 19:55 |
| 82. | Mother 3 | 2,203 | 0.12% | 9 | 12:12 |
| 83. | Super Bomberman 2 | 2,187 | 0.12% | 13 | 16:00 |
| 84. | Hydlide 3: The Space Memories | 2,179 | 0.12% | 30 | 42:52 |
| 85. | Final Fantasy | 2,143 | 0.12% | 29 | 25:31 |
| 86. | Final Fantasy Mystic Quest | 2,123 | 0.11% | 12 | 15:41 |
| 87. | Beep | 2,108 | 0.11% | 33 | 24:02 |
| 88. | SOUTH PARK: SNOW DAY! | 2,105 | 0.11% | 16 | 19:01 |
| 89. | Etrian Odyssey | 2,099 | 0.11% | 13 | 23:30 |
| 90. | Star Ocean: Blue Sphere | 2,082 | 0.11% | 11 | 17:32 |
| 91. | Final Fantasy XIII | 2,055 | 0.11% | 14 | 41:25 |
| 92. | Phantasmagoria of Flower View | 2,050 | 0.11% | 33 | 1:32:29 |
| 93. | Final Fantasy Tactics | 2,037 | 0.11% | 31 | 42:45 |
| 94. | The Legend of Zelda: Spirit Tracks | 2,001 | 0.11% | 18 | 25:22 |
| 95. | Kingdom Hearts II | 1,992 | 0.11% | 25 | 58:15 |
| 96. | Secret of Mana | 1,973 | 0.11% | 18 | 31:57 |
| 97. | Ys III: Wanderers from Ys | 1,971 | 0.11% | 11 | 15:21 |
| 98. | Super Metroid | 1,966 | 0.11% | 5 | 8:01 |
| 99. | Sorcerian | 1,927 | 0.10% | 31 | 59:31 |
| 100. | Mega Man Battle Network 5 | 1,927 | 0.10% | 1 | 1:55 |
