| 1. | Wario Land 4 | 1,486,065 | 7.69% | 1 | 1:18:04 |
| 2. | Super Smash Bros. Ultimate | 1,201,059 | 6.21% | 12 | 6:14:35:39 |
| 3. | Wario Land 3 | 876,469 | 4.53% | 1 | 2:54:30 |
| 4. | Pokémon Mystery Dungeon: Explorers of Sky | 847,796 | 4.39% | 47 | 1:04:01:21 |
| 5. | Kirby Mass Attack | 823,292 | 4.26% | 1 | 6:21:24 |
| 6. | Mario Party | 653,504 | 3.38% | 10 | 11:53:11 |
| 7. | Pokémon Stadium | 627,772 | 3.25% | 1 | 27:02 |
| 8. | Sonic Battle | 526,671 | 2.72% | 13 | 15:37:53 |
| 9. | Star Fox: Assault | 520,717 | 2.69% | 2 | 5:15:01 |
| 10. | Mario Kart 64 | 489,346 | 2.53% | 3 | 3:29:23 |
| 11. | Kirby Super Star Ultra | 469,203 | 2.43% | 2 | 3:30:18 |
| 12. | Legend of the Guardians: The Owls of Ga'Hoole | 412,981 | 2.14% | 1 | 3:05:21 |
| 13. | Yoshi's Story | 392,048 | 2.03% | 6 | 3:16:03 |
| 14. | Bomberman Hero | 342,408 | 1.77% | 2 | 2:59:28 |
| 15. | Pokémon Mystery Dungeon: Blue Rescue Team and Red Rescue Team | 314,067 | 1.62% | 29 | 14:38:08 |
| 16. | Mario Party 2 | 308,614 | 1.60% | 7 | 10:52:24 |
| 17. | Star Fox Command | 281,160 | 1.45% | 9 | 7:41:30 |
| 18. | Cave Story | 279,162 | 1.44% | 4 | 3:36:59 |
| 19. | The Legend of Spyro: Dawn of the Dragon | 270,815 | 1.40% | 2 | 4:43:04 |
| 20. | The Legend of Spyro: The Eternal Night | 270,442 | 1.40% | 1 | 4:24:33 |
| 21. | Dynamite Headdy | 266,592 | 1.38% | 1 | 1:27:11 |
| 22. | Mario Party 3 | 261,109 | 1.35% | 7 | 13:12:14 |
| 23. | Paper Mario: The Thousand-Year Door | 237,412 | 1.23% | 17 | 1:09:07:31 |
| 24. | Bomberman Tournament | 233,996 | 1.21% | 3 | 1:39:35 |
| 25. | Super Mario Odyssey | 232,164 | 1.20% | 2 | 4:35:54 |
| 26. | Diddy Kong Racing DS | 222,538 | 1.15% | 1 | 3:19:17 |
| 27. | Paper Mario | 214,441 | 1.11% | 16 | 20:21:34 |
| 28. | The Legend of Spyro: A New Beginning | 209,172 | 1.08% | 2 | 4:31:34 |
| 29. | Puzzle Bobble 4 | 197,414 | 1.02% | 3 | 1:32:14 |
| 30. | Super Princess Peach | 187,760 | 0.97% | 3 | 11:04:24 |
| 31. | Magical Tetris Challenge | 172,314 | 0.89% | 4 | 1:23:42 |
| 32. | Dr. Mario 64 | 170,265 | 0.88% | 3 | 1:23:45 |
| 33. | Wario Land: Shake It! | 154,282 | 0.80% | 6 | 6:03:39 |
| 34. | Bomberman Fantasy Race | 152,421 | 0.79% | 1 | 1:11:19 |
| 35. | Bomberman 64: The Second Attack! | 140,584 | 0.73% | 13 | 7:52:30 |
| 36. | Hamtaro: Ham-Ham Heartbreak | 130,115 | 0.67% | 9 | 11:54:38 |
| 37. | Star Fox 64 | 129,116 | 0.67% | 6 | 3:21:50 |
| 38. | Mario Party DS | 127,707 | 0.66% | 1 | 2:55:26 |
| 39. | Bomberman '94 | 120,243 | 0.62% | 5 | 1:40:20 |
| 40. | Kirby: Canvas Curse | 119,470 | 0.62% | 2 | 2:42:41 |
| 41. | Kirby Super Star | 110,431 | 0.57% | 2 | 3:36:08 |
| 42. | Pokémon Dash | 110,163 | 0.57% | 1 | 44:19 |
| 43. | Mario Superstar Baseball | 103,784 | 0.54% | 6 | 10:19:50 |
| 44. | Pokémon Mystery Dungeon: Gates to Infinity | 96,126 | 0.50% | 26 | 4:00:32:00 |
| 45. | Wario Land: Super Mario Land 3 | 92,163 | 0.48% | 1 | 1:59:48 |
| 46. | Bomberman 64 | 84,829 | 0.44% | 3 | 2:44:15 |
| 47. | Kirby: Nightmare in Dream Land | 83,348 | 0.43% | 2 | 1:07:22 |
| 48. | Kirby: Squeak Squad | 80,620 | 0.42% | 2 | 1:35:21 |
| 49. | Pokémon Super Mystery Dungeon | 80,219 | 0.41% | 26 | 3:20:40:48 |
| 50. | Wario's Woods | 75,861 | 0.39% | 1 | 3:30:31 |
| 51. | Mega Man Xtreme | 68,821 | 0.36% | 3 | 1:55:32 |
| 52. | PokéPark 2: Wonders Beyond | 67,580 | 0.35% | 6 | 14:22:05 |
| 53. | Pokémon Ruby and Sapphire | 66,506 | 0.34% | 15 | 13:48:09 |
| 54. | Pokémon Ranger | 66,403 | 0.34% | 15 | 1:06:10:09 |
| 55. | Wario: Master of Disguise | 65,405 | 0.34% | 1 | 5:14:20 |
| 56. | Kirby Tilt 'n' Tumble | 63,829 | 0.33% | 1 | 1:10:37 |
| 57. | The Legend of Zelda: Oracle of Ages | 59,648 | 0.31% | 1 | 2:59:58 |
| 58. | Bomberman Jetters | 59,440 | 0.31% | 2 | 1:45:15 |
| 59. | Pokémon Puzzle Challenge | 58,191 | 0.30% | 5 | 2:27:17 |
| 60. | Kirby's Dream Land 2 | 56,624 | 0.29% | 2 | 1:03:21 |
| 61. | Kirby no Kirakira Kizzu | 54,167 | 0.28% | 3 | 1:09:47 |
| 62. | Kirby 64: The Crystal Shards | 53,269 | 0.28% | 2 | 1:28:47 |
| 63. | Bomberman Quest | 52,909 | 0.27% | 1 | 50:57 |
| 64. | Bubble Bobble | 48,918 | 0.25% | 8 | 4:18:00 |
| 65. | Hamtaro: Ham-Hams Unite! | 47,487 | 0.25% | 1 | 2:27:30 |
| 66. | Donkey Kong Country 2 | 47,455 | 0.25% | 1 | 3:33:02 |
| 67. | Mario Party 4 | 46,727 | 0.24% | 6 | 6:21:36 |
| 68. | Hamtaro: Rainbow Rescue | 42,466 | 0.22% | 2 | 3:40:01 |
| 69. | Kirby's Star Stacker | 41,926 | 0.22% | 3 | 4:27:25 |
| 70. | Mega Man Battle Network 3 | 39,505 | 0.20% | 6 | 12:49:22 |
| 71. | Super Mario 64 DS | 35,453 | 0.18% | 1 | 3:53:32 |
| 72. | Mario Party 5 | 35,131 | 0.18% | 1 | 1:50:28 |
| 73. | Golden Axe II | 34,997 | 0.18% | 1 | 21:45 |
| 74. | Mole Mania | 34,673 | 0.18% | 1 | 2:16:09 |
| 75. | Diddy Kong Racing | 34,630 | 0.18% | 1 | 3:48:42 |
| 76. | Super Paper Mario | 34,448 | 0.18% | 12 | 18:59:56 |
| 77. | Kirby's Dream Land 3 | 34,282 | 0.18% | 2 | 1:36:44 |
| 78. | The Legend of Zelda: Oracle of Seasons | 33,377 | 0.17% | 1 | 2:18:57 |
| 79. | The Legend of Zelda: Link's Awakening | 32,441 | 0.17% | 1 | 2:00:48 |
| 80. | Pokémon Puzzle League | 29,462 | 0.15% | 3 | 1:43:12 |
| 81. | Twinkle Star Sprites | 28,400 | 0.15% | 5 | 1:34:38 |
| 82. | Mega Man Battle Network 4 | 26,848 | 0.14% | 5 | 1:09:32:00 |
| 83. | Kirby's Dream Land | 26,822 | 0.14% | 2 | 30:04 |
| 84. | WarCraft III | 25,070 | 0.13% | 11 | 1:19:01:34 |
| 85. | Donkey Kong Country 3 | 24,106 | 0.12% | 1 | 3:14:31 |
| 86. | Kirby's Avalanche | 23,920 | 0.12% | 1 | 22:20 |
| 87. | Bomberman '93 | 23,918 | 0.12% | 2 | 41:01 |
| 88. | Donkey Kong Country | 23,568 | 0.12% | 1 | 1:43:32 |
| 89. | Virtual Boy Wario Land | 22,958 | 0.12% | 3 | 1:26:36 |
| 90. | StarCraft II | 22,709 | 0.12% | 35 | 1:12:54:33 |
| 91. | Super Mario Land 2: 6 Golden Coins | 21,687 | 0.11% | 2 | 1:26:08 |
| 92. | Kingdom Hearts | 21,343 | 0.11% | 11 | 19:31:31 |
| 93. | Super Mario RPG | 20,841 | 0.11% | 8 | 11:47:11 |
| 94. | Mega Man Battle Network 2 | 19,938 | 0.10% | 5 | 8:53:06 |
| 95. | Future Cop: LAPD | 19,725 | 0.10% | 2 | 3:02:33 |
| 96. | Pokémon Emerald | 19,067 | 0.10% | 11 | 20:07:35 |
| 97. | Pokémon Platinum | 17,500 | 0.09% | 13 | 1:05:40:11 |
| 98. | Bomberman World | 17,326 | 0.09% | 2 | 56:05 |
| 99. | Command & Conquer: Red Alert 3 | 17,127 | 0.09% | 4 | 12:39:41 |
| 100. | Yoshi's Safari | 17,003 | 0.09% | 1 | 37:56 |
