| 1. | Super Princess Peach | 9,679,974 | 54.13% | 8 | 22:18 |
| 2. | The Legend of Zelda: Spirit Tracks | 1,053,905 | 5.89% | 18 | 1:23:32 |
| 3. | Mario & Luigi: Superstar Saga | 1,044,868 | 5.84% | 5 | 37:58 |
| 4. | Rayman Raving Rabbids | 521,335 | 2.92% | 1 | 8:36 |
| 5. | Kingdom Hearts 358/2 Days | 429,664 | 2.40% | 14 | 1:05:54 |
| 6. | Mega Man ZX | 328,768 | 1.84% | 13 | 1:32:34 |
| 7. | Metroid Fusion | 295,451 | 1.65% | 16 | 20:15 |
| 8. | Rayman 3: Hoodlum Havoc | 251,254 | 1.41% | 2 | 16:35 |
| 9. | Rayman | 225,686 | 1.26% | 3 | 21:43 |
| 10. | Super Mario RPG | 213,684 | 1.19% | 1 | 7:26 |
| 11. | Mega Man ZX Advent | 206,053 | 1.15% | 6 | 46:40 |
| 12. | The World Ends with You | 188,153 | 1.05% | 4 | 9:36 |
| 13. | The Legend of Zelda: Phantom Hourglass | 173,162 | 0.97% | 6 | 10:46 |
| 14. | Lunar Knights | 74,940 | 0.42% | 9 | 25:16 |
| 15. | Rayman: Hoodlums' Revenge | 66,259 | 0.37% | 1 | 5:11 |
| 16. | Moon | 36,013 | 0.20% | 1 | 10:19 |
| 17. | Mega Man Zero 3 | 27,987 | 0.16% | 1 | 6:46 |
| 18. | Mega Man Zero 4 | 24,744 | 0.14% | 1 | 5:41 |
| 19. | Klonoa 2: Dream Champ Tournament | 24,026 | 0.13% | 5 | 23:35 |
| 20. | Pokémon Emerald | 19,555 | 0.11% | 2 | 12:36 |
| 21. | Metroid: Zero Mission | 16,481 | 0.09% | 1 | 3:50 |
| 22. | Pokémon Black and White | 16,291 | 0.09% | 3 | 6:07 |
| 23. | Mega Man Battle Network 4 | 10,092 | 0.06% | 5 | 13:24 |
| 24. | Mega Man Battle Network 2 | 10,084 | 0.06% | 1 | 4:48 |
| 25. | Kingdom Hearts: Chain of Memories | 9,689 | 0.05% | 18 | 2:34:07 |
| 26. | Boktai: The Sun Is in Your Hand | 7,257 | 0.04% | 2 | 15:06 |
| 27. | Mega Man Star Force | 6,965 | 0.04% | 1 | 3:07 |
| 28. | Mega Man Battle Network 6 | 4,097 | 0.02% | 3 | 7:50 |
| 29. | Kingdom Hearts | 387 | 0.00% | 1 | 9:21 |
