| 1. | Mega Man Battle Network | 113,866 | 14.21% | 1 | 15:37 |
| 2. | Mega Man Battle Network 4 | 102,977 | 12.86% | 6 | 1:03:41 |
| 3. | Viewtiful Joe | 96,205 | 12.01% | 18 | 4:50:54 |
| 4. | Kirby 64: The Crystal Shards | 66,307 | 8.28% | 1 | 15:44 |
| 5. | Pole's Big Adventure | 56,914 | 7.10% | 1 | 30:52 |
| 6. | Mystic Square | 38,007 | 4.74% | 2 | 38:41 |
| 7. | Fire Emblem: Genealogy of the Holy War | 37,121 | 4.63% | 1 | 1:46 |
| 8. | Mega Man Battle Network 5 | 33,591 | 4.19% | 2 | 6:58 |
| 9. | Viewtiful Joe 2 | 33,134 | 4.14% | 10 | 7:54:24 |
| 10. | Fire Emblem: Path of Radiance | 28,697 | 3.58% | 2 | 20:09 |
| 11. | Unconnected Marketeers | 23,734 | 2.96% | 5 | 1:19:59 |
| 12. | Goemon's Great Adventure | 20,929 | 2.61% | 5 | 43:56 |
| 13. | Mountain of Faith | 14,579 | 1.82% | 15 | 2:59:03 |
| 14. | Mega Man | 13,637 | 1.70% | 5 | 1:52:52 |
| 15. | Hidden Star in Four Seasons | 10,947 | 1.37% | 7 | 2:35:54 |
| 16. | Subterranean Animism | 10,870 | 1.36% | 21 | 6:37:14 |
| 17. | Monster Hunter 2 | 9,952 | 1.24% | 5 | 2:06:49 |
| 18. | Lotus Land Story | 6,729 | 0.84% | 1 | 9:49 |
| 19. | Devil May Cry | 6,688 | 0.83% | 2 | 23:15 |
| 20. | Mega Man Battle Network 3 | 5,717 | 0.71% | 2 | 42:55 |
| 21. | Mega Man ZX Advent | 4,882 | 0.61% | 18 | 4:47:13 |
| 22. | Kirby's Dream Collection | 3,853 | 0.48% | 4 | 51:06 |
| 23. | Imperishable Night | 2,592 | 0.32% | 3 | 39:04 |
| 24. | Undefined Fantastic Object | 2,484 | 0.31% | 6 | 2:03:59 |
| 25. | Wily Beast and Weakest Creature | 2,212 | 0.28% | 8 | 2:10:42 |
| 26. | Bravely Second: End Layer | 2,052 | 0.26% | 1 | 2:20 |
| 27. | Violet Detector | 1,858 | 0.23% | 9 | 1:36:47 |
| 28. | Highly Responsive to Prayers | 1,412 | 0.18% | 1 | 17:03 |
| 29. | Ten Desires | 1,397 | 0.17% | 6 | 1:58:10 |
| 30. | Final Fantasy V | 1,320 | 0.16% | 8 | 3:57:21 |
| 31. | Double Dealing Character | 1,307 | 0.16% | 4 | 1:17:10 |
| 32. | Unfinished Dream of All Living Ghost | 1,107 | 0.14% | 8 | 49:06 |
| 33. | Final Fantasy VII | 770 | 0.10% | 9 | 1:00:16:46 |
| 34. | Monster Hunter: World | 701 | 0.09% | 16 | 0:00 |
| 35. | Impossible Spell Card | 533 | 0.07% | 2 | 1:22 |
| 36. | The Legend of Zelda: Majora's Mask | 497 | 0.06% | 1 | 19:53 |
| 37. | Legacy of Lunatic Kingdom | 460 | 0.06% | 1 | 19:35 |
| 38. | Double Spoiler | 373 | 0.05% | 1 | 6:01 |
| 39. | Final Fantasy IX | 348 | 0.04% | 1 | 3:23 |
| 40. | Fairy Wars | 315 | 0.04% | 2 | 31:03 |
| 41. | Story of Eastern Wonderland | 294 | 0.04% | 1 | 22:24 |
| 42. | Immaterial and Missing Power | 255 | 0.03% | 2 | 18:01 |
| 43. | The Embodiment of Scarlet Devil | 106 | 0.01% | 1 | 11:55 |
| 44. | Perfect Cherry Blossom | 90 | 0.01% | 1 | 18:36 |
| 45. | Boktai 2: Solar Boy Django | 89 | 0.01% | 1 | 7:31 |
