| 1. | Mario Power Tennis | 2,394,891 | 43.07% | 20 | 4:24:38 |
| 2. | Maximo: Ghosts to Glory | 182,764 | 3.29% | 35 | 12:53:39 |
| 3. | Dragon Quest VIII: The Journey of the Cursed King | 181,252 | 3.26% | 74 | 12:07:00 |
| 4. | Mario & Luigi: Superstar Saga | 161,424 | 2.90% | 91 | 17:16:34 |
| 5. | Fire Emblem: Path of Radiance | 147,077 | 2.64% | 206 | 2:08:28:23 |
| 6. | New Super Mario Bros. Wii | 129,640 | 2.33% | 72 | 11:58:10 |
| 7. | Road Runner's Death Valley Rally | 124,465 | 2.24% | 7 | 1:45:05 |
| 8. | Paper Mario: The Thousand-Year Door | 113,719 | 2.05% | 104 | 1:05:19:17 |
| 9. | Maximo vs. Army of Zin | 107,044 | 1.93% | 31 | 9:35:26 |
| 10. | Bomberman 64 | 96,426 | 1.73% | 40 | 7:14:13 |
| 11. | Castlevania: Portrait of Ruin | 71,578 | 1.29% | 35 | 9:06:19 |
| 12. | Tatsunoko vs. Capcom: Ultimate All-Stars | 71,565 | 1.29% | 98 | 13:32:40 |
| 13. | The Legend of Zelda: Ocarina of Time | 65,603 | 1.18% | 67 | 21:52:00 |
| 14. | Super Mario RPG | 64,588 | 1.16% | 43 | 1:11:35:52 |
| 15. | Turok: Dinosaur Hunter | 60,112 | 1.08% | 31 | 8:21:49 |
| 16. | Super Punch-Out!! | 49,173 | 0.88% | 11 | 1:40:04 |
| 17. | Wonder Boy III: The Dragon's Trap | 46,411 | 0.83% | 30 | 7:22:43 |
| 18. | Soulcalibur II | 43,699 | 0.79% | 8 | 59:43 |
| 19. | Alex Kidd in Miracle World | 42,904 | 0.77% | 8 | 1:22:23 |
| 20. | Sonic the Hedgehog 3 | 41,713 | 0.75% | 29 | 6:57:38 |
| 21. | Mystical Ninja Starring Goemon | 40,216 | 0.72% | 49 | 10:20:30 |
| 22. | Punch-Out!! | 36,334 | 0.65% | 17 | 2:31:45 |
| 23. | Wario World | 36,122 | 0.65% | 29 | 4:50:36 |
| 24. | Bomberman 64: The Second Attack! | 35,114 | 0.63% | 32 | 9:14:53 |
| 25. | Final Fantasy Mystic Quest | 34,581 | 0.62% | 80 | 16:57:23 |
| 26. | Super Smash Bros. Brawl | 34,289 | 0.62% | 65 | 8:57:41 |
| 27. | Arc Rise Fantasia | 30,960 | 0.56% | 173 | 2:08:06:49 |
| 28. | Mario Kart 64 | 30,826 | 0.55% | 18 | 4:17:58 |
| 29. | Donkey Kong Country 3 | 30,209 | 0.54% | 29 | 7:44:17 |
| 30. | Donkey Kong Country 2 | 29,845 | 0.54% | 26 | 6:25:26 |
| 31. | Mischief Makers | 27,938 | 0.50% | 34 | 5:25:46 |
| 32. | Kirby's Dream Land 3 | 27,549 | 0.50% | 26 | 6:57:07 |
| 33. | Mega Man X4 | 24,178 | 0.43% | 19 | 5:26:44 |
| 34. | Shantae | 23,678 | 0.43% | 24 | 6:17:18 |
| 35. | Sonic CD | 23,123 | 0.42% | 6 | 1:26:27 |
| 36. | Sonic the Hedgehog 2 | 22,887 | 0.41% | 14 | 1:59:33 |
| 37. | The Death and Return of Superman | 21,746 | 0.39% | 10 | 1:43:14 |
| 38. | Mighty Morphin Power Rangers | 21,715 | 0.39% | 3 | 1:00:18 |
| 39. | Star Fox 64 | 20,880 | 0.38% | 17 | 2:25:11 |
| 40. | Kirby's Adventure | 19,481 | 0.35% | 23 | 5:22:50 |
| 41. | Shaq Fu | 19,255 | 0.35% | 6 | 1:01:32 |
| 42. | Rosenkreuzstilette | 18,615 | 0.33% | 25 | 5:07:11 |
| 43. | Donkey Kong Country | 18,290 | 0.33% | 15 | 3:38:28 |
| 44. | Secret Of The Stars | 18,275 | 0.33% | 15 | 3:43:18 |
| 45. | Alex Kidd in the Enchanted Castle | 17,695 | 0.32% | 8 | 1:44:22 |
| 46. | Iggy's Reckin' Balls | 17,534 | 0.32% | 10 | 1:28:07 |
| 47. | Metroid Prime | 17,293 | 0.31% | 63 | 10:49:26 |
| 48. | Viewtiful Joe | 17,220 | 0.31% | 21 | 3:38:01 |
| 49. | The Flintstones: The Treasure of Sierra Madrock | 16,165 | 0.29% | 10 | 2:35:28 |
| 50. | Kirby's Dream Land 2 | 15,750 | 0.28% | 21 | 5:48:46 |
| 51. | Tiny Toon Adventures: Buster's Hidden Treasure | 14,427 | 0.26% | 9 | 2:25:11 |
| 52. | Mega Man X | 13,431 | 0.24% | 25 | 6:44:33 |
| 53. | Tiny Toon Adventures: Buster Busts Loose! | 13,269 | 0.24% | 9 | 2:25:43 |
| 54. | The Legend of Zelda: Link's Awakening | 13,129 | 0.24% | 11 | 2:37:22 |
| 55. | Monster World IV | 13,101 | 0.24% | 27 | 5:45:44 |
| 56. | Wonder Boy in Monster World | 11,986 | 0.22% | 16 | 2:51:18 |
| 57. | Super Smash Bros. for Wii U | 11,675 | 0.21% | 29 | 5:19:24 |
| 58. | Dragon View | 11,130 | 0.20% | 40 | 9:35:39 |
| 59. | Pokémon Black and White | 10,647 | 0.19% | 16 | 4:58:56 |
| 60. | ActRaiser | 10,063 | 0.18% | 22 | 6:13:01 |
| 61. | Thunder Force V | 9,546 | 0.17% | 7 | 1:06:06 |
| 62. | Sonic the Hedgehog | 9,528 | 0.17% | 7 | 1:09:24 |
| 63. | Wario Land: Super Mario Land 3 | 9,115 | 0.16% | 15 | 3:50:32 |
| 64. | Mega Man X3 | 8,915 | 0.16% | 12 | 3:19:34 |
| 65. | Super Mario Land 2: 6 Golden Coins | 8,644 | 0.16% | 15 | 2:21:58 |
| 66. | Timecop | 8,327 | 0.15% | 9 | 1:29:22 |
| 67. | The Batman | 8,220 | 0.15% | 5 | 1:18:58 |
| 68. | Kirby Super Star Ultra | 8,106 | 0.15% | 19 | 5:58:46 |
| 69. | Gunstar Heroes | 7,494 | 0.13% | 18 | 4:12:37 |
| 70. | Mega Man 7 | 7,153 | 0.13% | 13 | 7:36:49 |
| 71. | Castle of Illusion Starring Mickey Mouse | 7,060 | 0.13% | 6 | 1:21:18 |
| 72. | Jewel Master | 6,838 | 0.12% | 6 | 1:02:18 |
| 73. | Puyo Pop Fever | 6,819 | 0.12% | 2 | 27:07 |
| 74. | The Addams Family | 6,633 | 0.12% | 9 | 2:16:33 |
| 75. | Super Adventure Island | 6,544 | 0.12% | 18 | 3:04:48 |
| 76. | Super Mario Bros. | 6,428 | 0.12% | 3 | 50:22 |
| 77. | Mega Man X2 | 6,375 | 0.11% | 12 | 2:22:39 |
| 78. | Mario Is Missing! | 5,846 | 0.11% | 11 | 2:23:09 |
| 79. | Sonic Robo Blast 2 | 5,807 | 0.10% | 16 | 4:21:58 |
| 80. | New Super Mario Bros. 2 | 4,877 | 0.09% | 2 | 20:18 |
| 81. | Mario Golf | 4,863 | 0.09% | 36 | 11:12:48 |
| 82. | Super Paper Mario | 4,450 | 0.08% | 2 | 20:31 |
| 83. | Super Mario 64 | 4,432 | 0.08% | 8 | 2:04:41 |
| 84. | Dragon Quest IX: Sentinels of the Starry Skies | 4,332 | 0.08% | 9 | 2:26:39 |
| 85. | Mario Bros. | 4,331 | 0.08% | 3 | 46:30 |
| 86. | Revolution X | 4,038 | 0.07% | 3 | 45:10 |
| 87. | TimeSplitters: Future Perfect | 4,023 | 0.07% | 1 | 7:08 |
| 88. | The Legend of Zelda | 3,978 | 0.07% | 4 | 1:33:22 |
| 89. | Kirby's Avalanche | 3,885 | 0.07% | 2 | 45:19 |
| 90. | Super Bomberman | 3,861 | 0.07% | 7 | 1:46:34 |
| 91. | Resident Evil 4 | 3,661 | 0.07% | 11 | 2:35:53 |
| 92. | Super Mario Land | 3,654 | 0.07% | 3 | 35:26 |
| 93. | Mario Party 2 | 3,596 | 0.06% | 1 | 0:35 |
| 94. | Donkey Kong Country Returns | 3,384 | 0.06% | 22 | 8:35:37 |
| 95. | Lord of the Sword | 3,269 | 0.06% | 8 | 1:47:23 |
| 96. | Super Bomberman 2 | 3,213 | 0.06% | 5 | 1:21:22 |
| 97. | Capcom Fighting Evolution | 3,015 | 0.05% | 4 | 36:07 |
| 98. | Kirby Super Star | 2,907 | 0.05% | 2 | 22:12 |
| 99. | Super Mario World | 2,675 | 0.05% | 5 | 1:06:42 |
| 100. | Donkey Kong | 2,653 | 0.05% | 4 | 1:01:39 |
