| 1. | The Legend of Zelda: Ocarina of Time | 942,576 | 8.05% | 5 | 15:01 |
| 2. | Xenoblade Chronicles | 511,151 | 4.37% | 9 | 37:43 |
| 3. | Kirby's Epic Yarn | 474,165 | 4.05% | 2 | 2:41 |
| 4. | One Piece: Unlimited Cruise SP | 450,066 | 3.85% | 1 | 1:22 |
| 5. | Super Mario Bros. | 370,777 | 3.17% | 2 | 15:00 |
| 6. | Inazuma Eleven 3 | 332,915 | 2.84% | 4 | 10:16 |
| 7. | Persona 3 Portable | 284,476 | 2.43% | 2 | 3:54 |
| 8. | Inazuma Eleven 2 | 282,144 | 2.41% | 4 | 7:08 |
| 9. | Inazuma Eleven GO | 271,686 | 2.32% | 1 | 2:21 |
| 10. | Super Robot Wars OG Saga: Endless Frontier | 255,099 | 2.18% | 3 | 16:28 |
| 11. | Dragon Ball: Revenge of King Piccolo | 215,448 | 1.84% | 3 | 4:53 |
| 12. | Resident Evil: Revelations | 206,314 | 1.76% | 1 | 1:19 |
| 13. | Monster Hunter Tri | 184,538 | 1.58% | 4 | 17:27 |
| 14. | Professor Layton vs. Phoenix Wright: Ace Attorney | 174,377 | 1.49% | 1 | 3:00 |
| 15. | Zangeki no Reginleiv | 164,464 | 1.41% | 5 | 15:35 |
| 16. | Super Robot Wars NEO | 159,704 | 1.36% | 3 | 14:54 |
| 17. | Pokémon HeartGold and SoulSilver | 159,161 | 1.36% | 2 | 4:03 |
| 18. | Solatorobo: Red the Hunter | 152,088 | 1.30% | 2 | 6:07 |
| 19. | Street Fighter IV | 147,494 | 1.26% | 3 | 5:38 |
| 20. | Nintendogs + Cats | 145,927 | 1.25% | 1 | 6:09 |
| 21. | Dragon Quest VI: Realms of Revelation | 143,527 | 1.23% | 3 | 11:23 |
| 22. | Pokémon Ranger: Guardian Signs | 135,588 | 1.16% | 2 | 5:09 |
| 23. | Mobile Suit Gundam: Gundam vs. Gundam Next | 131,747 | 1.13% | 1 | 4:17 |
| 24. | The Last Story | 130,612 | 1.12% | 6 | 41:58 |
| 25. | Mega Man X4 | 128,810 | 1.10% | 2 | 9:50 |
| 26. | Metroid: Other M | 127,160 | 1.09% | 4 | 5:22 |
| 27. | SD Gundam G Generation Wars | 125,134 | 1.07% | 1 | 4:30 |
| 28. | Dragon Quest Monsters: Joker 2 | 114,470 | 0.98% | 1 | 3:32 |
| 29. | Kid Icarus: Uprising | 95,848 | 0.82% | 1 | 2:01 |
| 30. | Dead or Alive: Dimensions | 91,074 | 0.78% | 2 | 5:35 |
| 31. | Resident Evil: The Mercenaries 3D | 85,490 | 0.73% | 3 | 5:10 |
| 32. | Final Fantasy IV | 84,694 | 0.72% | 2 | 5:32 |
| 33. | No More Heroes: Heroes' Paradise | 78,828 | 0.67% | 2 | 3:45 |
| 34. | PokéPark Wii: Pikachu's Adventure | 78,280 | 0.67% | 2 | 3:40 |
| 35. | Golden Sun: Dark Dawn | 75,271 | 0.64% | 4 | 12:03 |
| 36. | River City Super Sports Challenge | 66,656 | 0.57% | 1 | 1:41 |
| 37. | Super Robo Gakuen | 65,185 | 0.56% | 1 | 4:15 |
| 38. | Tatsunoko vs. Capcom: Ultimate All-Stars | 54,429 | 0.47% | 3 | 8:10 |
| 39. | Shantae and the Pirate's Curse | 51,955 | 0.44% | 1 | 3:43 |
| 40. | Dragon Ball: Origins | 51,891 | 0.44% | 2 | 2:43 |
| 41. | Mega Man Zero Collection | 51,524 | 0.44% | 1 | 2:20 |
| 42. | Super Robot Wars L | 50,752 | 0.43% | 1 | 3:01 |
| 43. | Patchwork Heroes | 50,682 | 0.43% | 1 | 1:56 |
| 44. | The Legend of Zelda: Twilight Princess | 47,946 | 0.41% | 1 | 6:08 |
| 45. | Dragon Quest IX: Sentinels of the Starry Skies | 45,744 | 0.39% | 3 | 8:44 |
| 46. | Professor Layton and the Miracle Mask | 43,589 | 0.37% | 2 | 3:50 |
| 47. | Dragon Ball: Origins 2 | 41,968 | 0.36% | 2 | 4:27 |
| 48. | Ni no Kuni: Wrath of the White Witch | 40,878 | 0.35% | 1 | 4:08 |
| 49. | Dragon Ball Kai: Ultimate Butoden | 39,482 | 0.34% | 1 | 1:56 |
| 50. | Shin Megami Tensei: Strange Journey | 38,507 | 0.33% | 1 | 2:46 |
| 51. | Phoenix Wright: Ace Attorney | 37,947 | 0.32% | 1 | 1:12 |
| 52. | Fire Emblem: New Mystery of the Emblem | 36,140 | 0.31% | 1 | 4:52 |
| 53. | Etrian Odyssey III | 31,924 | 0.27% | 2 | 4:44 |
| 54. | Another World | 29,644 | 0.25% | 2 | 15:41 |
| 55. | Resonance of Fate | 29,329 | 0.25% | 1 | 2:22 |
| 56. | Wizardry: Seimei no Setsu | 25,671 | 0.22% | 1 | 2:02 |
| 57. | Super Mario All-Stars | 23,200 | 0.20% | 1 | 1:32 |
| 58. | Monster Hunter | 21,873 | 0.19% | 1 | 6:57 |
| 59. | Time Travelers | 21,123 | 0.18% | 1 | 1:57 |
| 60. | Street Fighter II | 20,447 | 0.17% | 1 | 2:05 |
| 61. | Ghost Trick: Phantom Detective | 19,952 | 0.17% | 1 | 2:26 |
| 62. | Pandora's Tower | 19,420 | 0.17% | 4 | 7:33 |
| 63. | Shiren the Wanderer 4: The Eye of God and the Devil's Navel | 17,851 | 0.15% | 1 | 0:45 |
| 64. | Panzer Dragoon | 17,028 | 0.15% | 1 | 7:23 |
| 65. | Atelier Rorona: The Alchemist of Arland | 16,366 | 0.14% | 1 | 6:57 |
| 66. | The Burst | 16,321 | 0.14% | 1 | 2:08 |
| 67. | Tetris Party | 16,123 | 0.14% | 1 | 2:13 |
| 68. | Professor Layton and the Last Specter | 16,091 | 0.14% | 1 | 0:16 |
| 69. | Final Fantasy III | 15,450 | 0.13% | 1 | 3:09 |
| 70. | Danball Senki W | 15,253 | 0.13% | 1 | 1:37 |
| 71. | Rabbids Go Home | 15,085 | 0.13% | 1 | 9:16 |
| 72. | Kamen Rider: Climax Heroes | 13,777 | 0.12% | 1 | 1:37 |
| 73. | Star Fox 64 3D | 13,383 | 0.11% | 1 | 2:39 |
| 74. | 3D Dot Game Heroes | 13,142 | 0.11% | 1 | 4:21 |
| 75. | Rune Factory 3: A Fantasy Harvest Moon | 13,000 | 0.11% | 1 | 1:39 |
| 76. | RayStorm | 12,764 | 0.11% | 1 | 3:59 |
| 77. | Ketsui: Kizuna Jigoku Tachi | 10,001 | 0.09% | 1 | 1:39 |
| 78. | Panzer Dragoon Saga | 9,478 | 0.08% | 3 | 15:11 |
| 79. | Radiant Historia | 8,729 | 0.07% | 1 | 1:57 |
| 80. | Knights in the Nightmare | 8,459 | 0.07% | 2 | 4:01 |
| 81. | Mega Man 10 | 8,367 | 0.07% | 1 | 1:51 |
| 82. | Yggdra Union | 7,968 | 0.07% | 1 | 2:33 |
| 83. | Line Attack Heroes | 7,936 | 0.07% | 1 | 2:43 |
| 84. | Fantasy Life | 7,520 | 0.06% | 1 | 2:17 |
| 85. | Pilotwings Resort | 7,203 | 0.06% | 1 | 1:00 |
| 86. | Virtua Fighter Kids | 6,544 | 0.06% | 1 | 2:56 |
| 87. | Resident Evil 7 | 6,173 | 0.05% | 1 | 1:41 |
| 88. | Panzer Dragoon II Zwei | 5,240 | 0.04% | 1 | 3:57 |
| 89. | Trick x Logic | 5,185 | 0.04% | 1 | 2:12 |
| 90. | No More Heroes 2: Desperate Struggle | 4,601 | 0.04% | 1 | 1:52 |
| 91. | Katamari Forever | 4,129 | 0.04% | 1 | 2:55 |
| 92. | Ar Tonelico: Melody of Elemia | 3,335 | 0.03% | 1 | 2:26 |
| 93. | Shenmue | 3,214 | 0.03% | 1 | 3:30 |
| 94. | Ni no Kuni: Dominion of the Dark Djinn | 2,959 | 0.03% | 1 | 0:30 |
| 95. | Ib | 1,732 | 0.01% | 1 | 3:16 |
| 96. | Segagaga | 1,500 | 0.01% | 1 | 1:34 |
| 97. | Shadow of the Colossus | 387 | 0.00% | 1 | 3:38 |
