| 1. | Super Mario 64 | 4,306,967 | 17.74% | 367 | 6:13:46:58 |
| 2. | I Wanna Be the Guy | 2,123,879 | 8.75% | 17 | 6:08:49 |
| 3. | Pokémon FireRed and LeafGreen | 1,916,666 | 7.89% | 101 | 18:05:45 |
| 4. | The Legend of Zelda: Majora's Mask | 1,515,005 | 6.24% | 98 | 2:20:12:31 |
| 5. | Super Mario Sunshine | 1,264,645 | 5.21% | 57 | 10:15:13 |
| 6. | Pokémon Emerald | 1,100,564 | 4.53% | 47 | 15:13:53 |
| 7. | The Legend of Zelda | 773,225 | 3.18% | 115 | 2:23:57:29 |
| 8. | Banjo-Tooie | 595,635 | 2.45% | 58 | 18:44:15 |
| 9. | Super Mario World | 517,340 | 2.13% | 57 | 19:37:49 |
| 10. | Geometry Dash | 453,168 | 1.87% | 1 | 6:25 |
| 11. | Super Mario Galaxy | 400,921 | 1.65% | 53 | 12:11:38 |
| 12. | Yoshi's Story | 329,760 | 1.36% | 27 | 4:32:42 |
| 13. | Gex: Enter the Gecko | 318,155 | 1.31% | 32 | 14:32:48 |
| 14. | Pikmin 2 | 281,546 | 1.16% | 56 | 19:20:44 |
| 15. | Pokémon Platinum | 274,384 | 1.13% | 81 | 1:18:29:57 |
| 16. | Metroid Prime | 238,799 | 0.98% | 40 | 2:12:58:07 |
| 17. | Ape Escape | 234,688 | 0.97% | 35 | 6:10:07 |
| 18. | Super Mario Galaxy 2 | 227,459 | 0.94% | 37 | 13:08:55 |
| 19. | Wario Land 4 | 206,319 | 0.85% | 25 | 4:33:52 |
| 20. | Super Smash Bros. Melee | 190,241 | 0.78% | 29 | 15:28:20 |
| 21. | Banjo-Kazooie | 181,985 | 0.75% | 65 | 1:09:51:52 |
| 22. | Pikmin | 167,611 | 0.69% | 30 | 4:15:18 |
| 23. | Super Mario RPG | 155,527 | 0.64% | 33 | 16:47:25 |
| 24. | The Legend of Zelda: Ocarina of Time | 146,886 | 0.60% | 69 | 5:22:01:14 |
| 25. | Paper Mario: The Thousand-Year Door | 143,596 | 0.59% | 57 | 1:12:44:41 |
| 26. | Sly Cooper and the Thievius Raccoonus | 137,439 | 0.57% | 28 | 6:29:05 |
| 27. | Water Girls | 137,381 | 0.57% | 2 | 30:20 |
| 28. | Metroid: Zero Mission | 131,323 | 0.54% | 20 | 16:06:08 |
| 29. | Super Mario Bros. | 129,626 | 0.53% | 12 | 1:43:58 |
| 30. | Mega Man 9 | 117,063 | 0.48% | 16 | 4:27:00 |
| 31. | Mega Man 10 | 114,055 | 0.47% | 15 | 5:38:42 |
| 32. | Mega Man | 111,463 | 0.46% | 21 | 6:36:09 |
| 33. | Pokémon HeartGold and SoulSilver | 103,387 | 0.43% | 32 | 23:02:38 |
| 34. | Metroid | 87,481 | 0.36% | 10 | 4:07:43 |
| 35. | Pikmin 3 | 87,425 | 0.36% | 29 | 10:56:52 |
| 36. | Pokémon Yellow | 85,826 | 0.35% | 28 | 22:01:14 |
| 37. | Gex 3: Deep Cover Gecko | 83,517 | 0.34% | 15 | 3:19:28 |
| 38. | Metroid II: Return of Samus | 83,190 | 0.34% | 11 | 1:44:09 |
| 39. | Pokémon Diamond and Pearl | 76,034 | 0.31% | 3 | 28:47 |
| 40. | Donkey Kong 64 | 74,706 | 0.31% | 24 | 13:24:02 |
| 41. | Mario Bros. | 74,336 | 0.31% | 7 | 2:13:44 |
| 42. | Conker's Bad Fur Day | 74,196 | 0.31% | 18 | 10:42:13 |
| 43. | Paper Mario | 65,901 | 0.27% | 5 | 7:27:02 |
| 44. | Super Paper Mario | 63,832 | 0.26% | 12 | 2:58:45 |
| 45. | Super Smash Bros. Brawl | 55,838 | 0.23% | 9 | 2:02:28:01 |
| 46. | WarioWare: Twisted! | 53,306 | 0.22% | 1 | 1:06:08 |
| 47. | Pokémon Crystal | 52,862 | 0.22% | 20 | 1:04:51:48 |
| 48. | Yoshi's Island DS | 52,117 | 0.21% | 24 | 19:42:41 |
| 49. | Star Fox 64 | 44,776 | 0.18% | 11 | 6:37:54 |
| 50. | The Legend of Zelda: The Minish Cap | 44,441 | 0.18% | 25 | 19:54:05 |
| 51. | The Legend of Zelda: Link's Awakening | 44,281 | 0.18% | 15 | 15:12:26 |
| 52. | Super Metroid | 43,604 | 0.18% | 20 | 1:12:40:14 |
| 53. | My Pokémon Ranch | 42,698 | 0.18% | 1 | 15:30 |
| 54. | Banjo-Kazooie: Grunty's Revenge | 40,060 | 0.16% | 2 | 21:58 |
| 55. | Yooka-Laylee | 36,725 | 0.15% | 24 | 18:37:21 |
| 56. | Minecraft | 35,525 | 0.15% | 20 | 14:03:13 |
| 57. | Plok! | 34,776 | 0.14% | 9 | 5:33:15 |
| 58. | Pokémon Black and White | 34,649 | 0.14% | 15 | 1:01:50:06 |
| 59. | Mario Paint | 33,712 | 0.14% | 1 | 6:33 |
| 60. | The Legend of Zelda: Twilight Princess | 33,252 | 0.14% | 32 | 2:04:03:33 |
| 61. | Super Smash Bros. for Wii U | 31,677 | 0.13% | 16 | 1:01:31:16 |
| 62. | The Legend of Zelda: Oracle of Seasons | 28,975 | 0.12% | 7 | 1:14:18 |
| 63. | MOTAS | 27,478 | 0.11% | 4 | 3:53:28 |
| 64. | Notpron | 25,198 | 0.10% | 3 | 3:22:55 |
| 65. | This is the Only Level Too | 24,973 | 0.10% | 2 | 24:45 |
| 66. | Loom | 23,405 | 0.10% | 2 | 15:55 |
| 67. | Tomb Raider | 23,312 | 0.10% | 12 | 1:02:00:02 |
| 68. | Pac-Man | 23,230 | 0.10% | 2 | 20:45 |
| 69. | Pokémon Black 2 and White 2 | 22,808 | 0.09% | 10 | 6:46:15 |
| 70. | Diddy Kong Racing | 22,638 | 0.09% | 6 | 6:03:43 |
| 71. | Kirby Super Star | 21,719 | 0.09% | 7 | 6:03:35 |
| 72. | Kirby's Adventure | 20,426 | 0.08% | 8 | 3:29:29 |
| 73. | Sonic the Hedgehog 2 | 19,821 | 0.08% | 2 | 3:34:21 |
| 74. | Metroid Fusion | 19,762 | 0.08% | 10 | 14:32:25 |
| 75. | The Legend of Zelda: The Wind Waker | 19,237 | 0.08% | 13 | 1:01:42:57 |
| 76. | Super Smash Bros. | 19,029 | 0.08% | 5 | 3:57:01 |
| 77. | Ristar | 18,941 | 0.08% | 7 | 2:03:41 |
| 78. | The Legend of Zelda: A Link to the Past | 18,608 | 0.08% | 18 | 1:04:27:33 |
| 79. | Plok | 18,372 | 0.08% | 4 | 1:02:59 |
| 80. | The Legend of Zelda: The Wind Waker HD | 18,356 | 0.08% | 10 | 8:56:10 |
| 81. | Super Mario 64 DS | 18,177 | 0.07% | 6 | 16:46:33 |
| 82. | Boom Blox | 18,019 | 0.07% | 3 | 4:04:03 |
| 83. | Tomb Raider: The Last Revelation | 17,264 | 0.07% | 6 | 1:05:23 |
| 84. | Super Mario Land | 17,139 | 0.07% | 1 | 1:37 |
| 85. | Super Mario Maker | 16,580 | 0.07% | 9 | 12:33:48 |
| 86. | The Elder Scrolls V: Skyrim | 16,372 | 0.07% | 17 | 14:43:25 |
| 87. | Super Smash Bros. Ultimate | 16,287 | 0.07% | 16 | 1:03:31:04 |
| 88. | Happy Wheels | 16,202 | 0.07% | 2 | 23:49 |
| 89. | Banjo-Kazooie: Nuts & Bolts | 16,198 | 0.07% | 1 | 21:17 |
| 90. | Undertale | 15,655 | 0.06% | 8 | 19:30:54 |
| 91. | QWOP | 15,572 | 0.06% | 1 | 7:48 |
| 92. | Metroid Prime 3: Corruption | 15,218 | 0.06% | 8 | 21:44:33 |
| 93. | Minesweeper | 14,626 | 0.06% | 1 | 4:49 |
| 94. | WarioWare, Inc.: Mega Microgames! | 14,441 | 0.06% | 3 | 3:55:34 |
| 95. | Final Fantasy | 14,343 | 0.06% | 2 | 19:03 |
| 96. | Pokemon X and Y | 13,788 | 0.06% | 4 | 2:15:54 |
| 97. | Mega Man: Dr. Wily's Revenge | 13,694 | 0.06% | 4 | 11:21:20 |
| 98. | Super Mario Bros.: The Lost Levels | 13,599 | 0.06% | 1 | 14:52 |
| 99. | Fantasy Zone | 13,276 | 0.05% | 2 | 12:32 |
| 100. | Astral Ascent | 13,124 | 0.05% | 1 | 10:58 |
