| 1. | Super Mario World | 7,563,070 | 29.49% | 1 | 3:25:13 |
| 2. | Super Mario 64 | 4,037,513 | 15.75% | 1 | 5:56:47 |
| 3. | The Legend of Zelda: The Minish Cap | 1,666,464 | 6.50% | 1 | 11:58:24 |
| 4. | Wolfenstein 3D | 1,204,193 | 4.70% | 1 | 7:05:36 |
| 5. | The Embodiment of Scarlet Devil | 883,574 | 3.45% | 2 | 1:05:16 |
| 6. | Lemmings | 501,301 | 1.95% | 2 | 7:27:01 |
| 7. | Castlevania: Symphony of the Night | 378,133 | 1.47% | 4 | 19:49:55 |
| 8. | The Legend of Zelda: Majora's Mask | 363,817 | 1.42% | 3 | 21:52:42 |
| 9. | Phantasmagoria of Flower View | 226,026 | 0.88% | 15 | 6:24:06 |
| 10. | Chip's Challenge | 195,560 | 0.76% | 1 | 6:30:23 |
| 11. | Earthbound | 172,555 | 0.67% | 3 | 16:45:36 |
| 12. | Transport Tycoon | 129,770 | 0.51% | 2 | 20:09:15 |
| 13. | Rayman | 108,586 | 0.42% | 1 | 4:02:41 |
| 14. | Hidden Star in Four Seasons | 92,387 | 0.36% | 1 | 1:12:18 |
| 15. | Army Men: Sarge's Heroes | 82,382 | 0.32% | 1 | 4:00:56 |
| 16. | Chrono Trigger | 68,175 | 0.27% | 3 | 18:32:34 |
| 17. | Secret Agent | 61,174 | 0.24% | 1 | 2:59:56 |
| 18. | Wario Land II | 43,584 | 0.17% | 1 | 8:58:17 |
| 19. | Wario Land 3 | 43,191 | 0.17% | 2 | 8:20:55 |
| 20. | Army Men: Sarge's Heroes 2 | 40,661 | 0.16% | 1 | 1:48:47 |
| 21. | The Legend of Zelda: Ocarina of Time | 37,958 | 0.15% | 2 | 16:59:14 |
| 22. | Mario Kart 64 | 22,329 | 0.09% | 2 | 55:59 |
| 23. | Super Mario Bros. 2 | 18,610 | 0.07% | 1 | 1:20:42 |
| 24. | Super Mario Bros. 3 | 16,575 | 0.06% | 1 | 2:55:47 |
| 25. | Diablo II | 15,422 | 0.06% | 1 | 4:08 |
| 26. | Zone Raiders | 15,177 | 0.06% | 1 | 3:17:38 |
| 27. | The Legend of Zelda: Oracle of Ages | 13,320 | 0.05% | 2 | 21:53:28 |
| 28. | The Legend of Zelda: Link's Awakening | 12,836 | 0.05% | 1 | 6:59:40 |
| 29. | Highly Responsive to Prayers | 11,653 | 0.05% | 3 | 44:49 |
| 30. | Tales of Phantasia | 8,888 | 0.03% | 3 | 1:04:36:46 |
| 31. | Final Fantasy VI | 8,766 | 0.03% | 4 | 1:13:22:29 |
| 32. | Castlevania: Aria of Sorrow | 8,171 | 0.03% | 2 | 13:08:48 |
| 33. | The Legend of Zelda: Oracle of Seasons | 7,711 | 0.03% | 2 | 20:23:56 |
| 34. | Lotus Land Story | 7,174 | 0.03% | 4 | 47:20 |
| 35. | Mario Bros. | 6,804 | 0.03% | 1 | 39:29 |
| 36. | Double Spoiler | 4,639 | 0.02% | 10 | 1:58:18 |
| 37. | The Legend of Zelda: A Link to the Past | 4,304 | 0.02% | 1 | 6:26:19 |
| 38. | Final Fantasy V | 3,280 | 0.01% | 3 | 1:06:56:25 |
| 39. | Final Fantasy IV: The After Years | 2,955 | 0.01% | 2 | 14:35:15 |
| 40. | Wario Land 4 | 2,763 | 0.01% | 1 | 11:32:49 |
| 41. | Imperishable Night | 2,516 | 0.01% | 3 | 28:18 |
| 42. | Yoshi's Island: Super Mario Advance 3 | 2,204 | 0.01% | 1 | 9:12:51 |
| 43. | Mountain of Faith | 2,041 | 0.01% | 4 | 54:38 |
| 44. | Scarlet Weather Rhapsody | 1,715 | 0.01% | 6 | 2:10:52 |
| 45. | Perfect Cherry Blossom | 1,449 | 0.01% | 3 | 1:15:30 |
| 46. | Subterranean Animism | 831 | 0.00% | 1 | 25:45 |
| 47. | Gran Turismo 3: A-Spec | 831 | 0.00% | 1 | 1:59 |
| 48. | Final Fantasy | 831 | 0.00% | 1 | 11:02:24 |
| 49. | Ten Desires | 746 | 0.00% | 1 | 29:15 |
| 50. | Fairy Wars | 742 | 0.00% | 3 | 31:30 |
| 51. | Undefined Fantastic Object | 453 | 0.00% | 1 | 29:30 |
| 52. | Mario & Luigi: Superstar Saga | 368 | 0.00% | 2 | 15:48:54 |
