| 1. | Chrono Trigger | 3,660,080 | 3.92% | 161 | 11:25:46 |
| 2. | Final Fantasy VI | 3,556,961 | 3.81% | 158 | 12:05:18 |
| 3. | The Legend of Zelda: Ocarina of Time | 2,897,310 | 3.10% | 85 | 5:50:00 |
| 4. | Donkey Kong Country 2 | 2,854,314 | 3.06% | 103 | 7:00:01 |
| 5. | Mega Man 2 | 2,670,518 | 2.86% | 72 | 4:45:45 |
| 6. | Final Fantasy VII | 2,443,529 | 2.62% | 109 | 8:17:18 |
| 7. | The Legend of Zelda: A Link to the Past | 2,099,595 | 2.25% | 68 | 4:56:04 |
| 8. | Super Mario 64 | 2,058,661 | 2.20% | 30 | 2:01:48 |
| 9. | Mega Man X | 1,971,387 | 2.11% | 41 | 3:01:47 |
| 10. | Donkey Kong Country | 1,856,021 | 1.99% | 70 | 5:21:45 |
| 11. | Super Metroid | 1,761,142 | 1.89% | 77 | 5:39:36 |
| 12. | Street Fighter II | 1,537,450 | 1.65% | 78 | 4:54:24 |
| 13. | Sonic the Hedgehog | 1,276,940 | 1.37% | 33 | 2:08:15 |
| 14. | Mega Man 3 | 1,252,085 | 1.34% | 39 | 2:42:57 |
| 15. | Sonic the Hedgehog 3 | 1,194,276 | 1.28% | 46 | 3:01:00 |
| 16. | The Legend of Zelda: Link's Awakening | 1,186,795 | 1.27% | 76 | 5:16:59 |
| 17. | Sonic the Hedgehog 2 | 1,085,380 | 1.16% | 32 | 2:01:54 |
| 18. | The Legend of Zelda: The Wind Waker | 1,072,356 | 1.15% | 21 | 1:25:09 |
| 19. | Super Smash Bros. Melee | 958,414 | 1.03% | 12 | 49:41 |
| 20. | Final Fantasy IX | 926,189 | 0.99% | 65 | 4:41:33 |
| 21. | Chrono Cross | 839,743 | 0.90% | 51 | 3:28:56 |
| 22. | Final Fantasy VIII | 837,122 | 0.90% | 75 | 5:17:50 |
| 23. | Final Fantasy X | 812,611 | 0.87% | 40 | 2:51:59 |
| 24. | Super Mario RPG | 789,199 | 0.85% | 38 | 2:18:49 |
| 25. | Mega Man 9 | 788,519 | 0.84% | 23 | 1:30:56 |
| 26. | Donkey Kong Country 3 | 769,264 | 0.82% | 34 | 2:31:39 |
| 27. | Pokémon Red and Blue | 755,283 | 0.81% | 24 | 1:39:33 |
| 28. | Super Mario Bros. | 740,116 | 0.79% | 26 | 1:17:47 |
| 29. | Final Fantasy V | 698,141 | 0.75% | 46 | 3:02:00 |
| 30. | The Legend of Zelda: Majora's Mask | 669,157 | 0.72% | 21 | 1:20:41 |
| 31. | Metroid Prime | 655,866 | 0.70% | 18 | 1:10:35 |
| 32. | Castlevania II: Simon's Quest | 576,902 | 0.62% | 19 | 1:25:07 |
| 33. | Mega Man X2 | 575,115 | 0.62% | 16 | 1:08:14 |
| 34. | Sonic & Knuckles | 564,059 | 0.60% | 24 | 1:34:51 |
| 35. | Super Mario Advance 4: Super Mario Bros. 3 | 494,228 | 0.53% | 12 | 39:42 |
| 36. | Earthbound | 493,930 | 0.53% | 31 | 1:32:54 |
| 37. | Teenage Mutant Ninja Turtles IV: Turtles in Time | 475,698 | 0.51% | 12 | 49:08 |
| 38. | Kirby Super Star | 474,429 | 0.51% | 13 | 50:26 |
| 39. | Super Mario Bros. 2 | 465,438 | 0.50% | 13 | 39:53 |
| 40. | Super Mario World | 455,014 | 0.49% | 14 | 48:30 |
| 41. | The Legend of Zelda | 445,848 | 0.48% | 23 | 1:39:09 |
| 42. | Mega Man X3 | 431,010 | 0.46% | 19 | 1:17:32 |
| 43. | Super Mario World 2: Yoshi's Island | 422,103 | 0.45% | 17 | 58:33 |
| 44. | Nights into Dreams | 409,907 | 0.44% | 21 | 1:24:41 |
| 45. | Pokémon Gold and Silver | 406,678 | 0.44% | 14 | 53:36 |
| 46. | Undertale | 370,411 | 0.40% | 22 | 1:18:49 |
| 47. | The Legend of Zelda: Twilight Princess | 357,763 | 0.38% | 24 | 1:35:08 |
| 48. | Deus Ex | 356,969 | 0.38% | 11 | 52:28 |
| 49. | Castlevania | 318,503 | 0.34% | 10 | 45:32 |
| 50. | Super Smash Bros. | 315,475 | 0.34% | 3 | 10:50 |
| 51. | Mega Man X4 | 293,820 | 0.31% | 13 | 59:43 |
| 52. | Castlevania: Symphony of the Night | 267,956 | 0.29% | 15 | 56:59 |
| 53. | Super Mario Galaxy | 266,985 | 0.29% | 10 | 41:16 |
| 54. | Castlevania | 258,228 | 0.28% | 9 | 37:12 |
| 55. | Super Castlevania IV | 247,054 | 0.26% | 21 | 1:43:23 |
| 56. | Super Mario 3D World | 245,789 | 0.26% | 1 | 3:24 |
| 57. | Streets of Rage 2 | 237,969 | 0.25% | 14 | 48:50 |
| 58. | Cave Story | 231,523 | 0.25% | 4 | 19:55 |
| 59. | Sonic CD | 228,452 | 0.24% | 8 | 33:47 |
| 60. | Wild Arms | 221,513 | 0.24% | 25 | 1:56:59 |
| 61. | Phoenix Wright: Ace Attorney | 220,143 | 0.24% | 6 | 24:22 |
| 62. | The Secret of Monkey Island | 219,700 | 0.24% | 4 | 14:40 |
| 63. | Secret of Mana | 207,837 | 0.22% | 20 | 1:26:08 |
| 64. | Mega Man 4 | 207,679 | 0.22% | 9 | 35:06 |
| 65. | The Legend of Zelda: Skyward Sword | 188,842 | 0.20% | 17 | 1:04:01 |
| 66. | Doom II: Hell on Earth | 188,078 | 0.20% | 12 | 56:02 |
| 67. | Super Meat Boy | 186,161 | 0.20% | 4 | 16:36 |
| 68. | Pokémon Diamond and Pearl | 184,478 | 0.20% | 11 | 34:54 |
| 69. | Golden Sun | 182,318 | 0.20% | 20 | 1:05:27 |
| 70. | Final Fantasy VII Remake | 176,333 | 0.19% | 18 | 55:44 |
| 71. | Zelda II: The Adventure of Link | 172,721 | 0.18% | 13 | 46:05 |
| 72. | Metal Gear Solid 2: Sons of Liberty | 170,389 | 0.18% | 8 | 34:57 |
| 73. | Mass Effect | 168,794 | 0.18% | 8 | 26:55 |
| 74. | Mega Man X5 | 162,291 | 0.17% | 8 | 35:14 |
| 75. | The Legend of Zelda: Breath of the Wild | 161,896 | 0.17% | 17 | 1:01:13 |
| 76. | Mega Man | 161,314 | 0.17% | 9 | 27:53 |
| 77. | Metal Gear Solid | 158,696 | 0.17% | 8 | 29:13 |
| 78. | Castlevania: Bloodlines | 151,251 | 0.16% | 6 | 24:39 |
| 79. | Pokémon Mystery Dungeon: Blue Rescue Team and Red Rescue Team | 148,722 | 0.16% | 10 | 42:11 |
| 80. | Final Fantasy XIII | 147,819 | 0.16% | 5 | 21:11 |
| 81. | Kingdom Hearts | 146,079 | 0.16% | 4 | 16:51 |
| 82. | Kirby's Dream Land | 143,387 | 0.15% | 6 | 21:24 |
| 83. | Xenogears | 142,819 | 0.15% | 13 | 57:15 |
| 84. | Mega Man X6 | 141,660 | 0.15% | 5 | 22:56 |
| 85. | Streets of Rage | 140,865 | 0.15% | 11 | 37:35 |
| 86. | Castlevania III: Dracula's Curse | 140,837 | 0.15% | 12 | 49:46 |
| 87. | Lufia II: Rise of the Sinistrals | 131,780 | 0.14% | 10 | 34:03 |
| 88. | Metroid Prime 2: Echoes | 130,514 | 0.14% | 7 | 32:27 |
| 89. | Street Fighter IV | 126,541 | 0.14% | 4 | 16:31 |
| 90. | New Super Mario Bros. | 124,621 | 0.13% | 3 | 13:58 |
| 91. | Bad Dudes | 123,289 | 0.13% | 1 | 3:22 |
| 92. | Mega Man X8 | 120,562 | 0.13% | 4 | 15:53 |
| 93. | Command & Conquer: Red Alert | 113,237 | 0.12% | 4 | 18:35 |
| 94. | Journey | 112,033 | 0.12% | 21 | 1:10:37 |
| 95. | Castlevania: Portrait of Ruin | 110,698 | 0.12% | 5 | 19:32 |
| 96. | Final Fantasy | 106,328 | 0.11% | 2 | 7:18 |
| 97. | Banjo-Kazooie | 106,309 | 0.11% | 6 | 19:38 |
| 98. | Ecco: The Tides of Time | 105,826 | 0.11% | 9 | 38:51 |
| 99. | Seiken Densetsu 3 | 104,924 | 0.11% | 25 | 1:52:05 |
| 100. | Skies of Arcadia | 103,413 | 0.11% | 23 | 1:41:38 |
