| 1. | Super Mario World 2: Yoshi's Island | 231,156 | 19.79% | 2 | 6:10 |
| 2. | Final Fantasy | 198,257 | 16.97% | 38 | 5:14:21 |
| 3. | Final Fantasy IX | 146,984 | 12.58% | 1 | 3:26 |
| 4. | Doom | 79,421 | 6.80% | 11 | 1:59:17 |
| 5. | Final Fantasy VI | 56,800 | 4.86% | 3 | 31:04 |
| 6. | Monster Hunter Tri | 26,067 | 2.23% | 42 | 6:42:38 |
| 7. | Front Mission | 23,550 | 2.02% | 2 | 15:21 |
| 8. | Final Fantasy IV | 18,677 | 1.60% | 3 | 19:13 |
| 9. | Kirby: Nightmare in Dream Land | 17,983 | 1.54% | 12 | 1:32:50 |
| 10. | Breath of Fire II | 14,391 | 1.23% | 6 | 54:34 |
| 11. | Mega Man X | 14,335 | 1.23% | 18 | 1:36:37 |
| 12. | Xenogears | 14,069 | 1.20% | 1 | 9:28 |
| 13. | Seiken Densetsu 3 | 12,338 | 1.06% | 10 | 1:36:29 |
| 14. | Live A Live | 12,175 | 1.04% | 8 | 46:25 |
| 15. | Lufia & the Fortress of Doom | 11,110 | 0.95% | 2 | 17:49 |
| 16. | Donkey Kong Country | 9,825 | 0.84% | 2 | 7:57 |
| 17. | The Legend of Zelda: A Link to the Past | 9,151 | 0.78% | 2 | 14:56 |
| 18. | Mega Man Battle Network 3 | 7,940 | 0.68% | 1 | 14:03 |
| 19. | Romancing SaGa 3 | 7,582 | 0.65% | 7 | 59:06 |
| 20. | Luigi's Mansion | 7,469 | 0.64% | 6 | 29:35 |
| 21. | Wonder Project J | 7,227 | 0.62% | 3 | 26:38 |
| 22. | Secret of Mana | 6,664 | 0.57% | 2 | 16:20 |
| 23. | Sword of Mana | 6,420 | 0.55% | 3 | 22:27 |
| 24. | Metroid Prime 2: Echoes | 4,899 | 0.42% | 11 | 1:59:02 |
| 25. | Final Fantasy V | 4,529 | 0.39% | 4 | 38:23 |
| 26. | Illusion of Gaia | 4,464 | 0.38% | 3 | 19:11 |
| 27. | Castlevania III: Dracula's Curse | 4,320 | 0.37% | 1 | 1:58 |
| 28. | Tales of Phantasia | 4,228 | 0.36% | 1 | 2:20 |
| 29. | Fire Emblem: The Binding Blade | 4,143 | 0.35% | 3 | 29:39 |
| 30. | Castlevania: Aria of Sorrow | 4,100 | 0.35% | 2 | 8:18 |
| 31. | Mega Man Battle Network 5 | 4,091 | 0.35% | 1 | 13:49 |
| 32. | Mario vs. Donkey Kong | 3,449 | 0.30% | 2 | 3:36 |
| 33. | Radical Dreamers | 3,372 | 0.29% | 2 | 10:41 |
| 34. | Ogre Battle: The March of the Black Queen | 3,318 | 0.28% | 2 | 17:30 |
| 35. | Mother 3 | 2,843 | 0.24% | 5 | 1:01:24 |
| 36. | Klonoa 2: Dream Champ Tournament | 2,841 | 0.24% | 1 | 11:48 |
| 37. | Baten Kaitos: Eternal Wings and the Lost Ocean | 2,779 | 0.24% | 1 | 2:35 |
| 38. | The Legend of Zelda: Oracle of Seasons | 2,745 | 0.23% | 1 | 1:36 |
| 39. | Metroid Fusion | 2,716 | 0.23% | 2 | 14:13 |
| 40. | Dragon Quest VI: Realms of Revelation | 2,655 | 0.23% | 1 | 6:57 |
| 41. | Bahamut Lagoon | 2,421 | 0.21% | 3 | 19:31 |
| 42. | Breath of Fire | 2,412 | 0.21% | 2 | 14:04 |
| 43. | Chrono Trigger | 2,407 | 0.21% | 3 | 29:44 |
| 44. | Treasure of the Rudras | 2,361 | 0.20% | 3 | 22:45 |
| 45. | Earthbound | 2,198 | 0.19% | 3 | 22:54 |
| 46. | Secret of Evermore | 2,128 | 0.18% | 2 | 13:13 |
| 47. | Donkey Kong Country 2 | 2,100 | 0.18% | 1 | 3:14 |
| 48. | Final Fantasy VIII | 2,073 | 0.18% | 3 | 18:37 |
| 49. | Treasure Hunter G | 2,055 | 0.18% | 2 | 12:58 |
| 50. | The Legend of Zelda: Oracle of Ages | 1,964 | 0.17% | 1 | 1:36 |
| 51. | Scurge: Hive | 1,941 | 0.17% | 1 | 9:58 |
| 52. | Mega Man Battle Network 6 | 1,897 | 0.16% | 2 | 16:55 |
| 53. | Tactics Ogre: The Knight of Lodis | 1,807 | 0.15% | 3 | 25:38 |
| 54. | ActRaiser | 1,793 | 0.15% | 1 | 4:19 |
| 55. | Super Castlevania IV | 1,728 | 0.15% | 3 | 13:25 |
| 56. | Lufia: The Ruins of Lore | 1,624 | 0.14% | 2 | 16:39 |
| 57. | Castlevania: Harmony of Dissonance | 1,579 | 0.14% | 1 | 5:13 |
| 58. | Onimusha Tactics | 1,521 | 0.13% | 2 | 12:51 |
| 59. | The Legend of Zelda: The Minish Cap | 1,511 | 0.13% | 2 | 21:15 |
| 60. | Terranigma | 1,470 | 0.13% | 3 | 27:23 |
| 61. | Golden Sun: The Lost Age | 1,447 | 0.12% | 3 | 28:41 |
| 62. | Kirby's Dream Land 3 | 1,430 | 0.12% | 1 | 5:45 |
| 63. | Mega Man Battle Network 2 | 1,384 | 0.12% | 2 | 18:12 |
| 64. | Mega Man Battle Network 4 | 1,377 | 0.12% | 1 | 11:03 |
| 65. | Final Fantasy Tactics S | 1,315 | 0.11% | 1 | 3:03 |
| 66. | Final Fantasy XV | 1,264 | 0.11% | 1 | 7:12 |
| 67. | Mario & Luigi: Superstar Saga | 1,253 | 0.11% | 3 | 29:49 |
| 68. | Castlevania: Circle of the Moon | 1,179 | 0.10% | 1 | 8:44 |
| 69. | Soul Blazer | 1,165 | 0.10% | 2 | 8:42 |
| 70. | The Legend of Zelda: Link's Awakening | 1,153 | 0.10% | 1 | 1:10 |
| 71. | Metroid: Zero Mission | 1,142 | 0.10% | 2 | 10:38 |
| 72. | Mega Man 7 | 1,054 | 0.09% | 2 | 7:15 |
| 73. | Metroid Prime 3: Corruption | 1,022 | 0.09% | 2 | 33:45 |
| 74. | Mega Man Zero | 1,000 | 0.09% | 1 | 7:47 |
| 75. | Super Mario World | 994 | 0.09% | 1 | 3:36 |
| 76. | Castlevania: Dracula X | 989 | 0.08% | 1 | 2:03 |
| 77. | Kingdom Hearts II | 955 | 0.08% | 1 | 24:38 |
| 78. | Golden Sun | 950 | 0.08% | 1 | 14:56 |
| 79. | Zelda II: The Adventure of Link | 942 | 0.08% | 1 | 1:24 |
| 80. | Mega Man Battle Network | 929 | 0.08% | 2 | 21:00 |
| 81. | Borderlands 2 | 919 | 0.08% | 4 | 17:48 |
| 82. | Lunar Legend | 907 | 0.08% | 1 | 2:16 |
| 83. | Pokémon Emerald | 883 | 0.08% | 1 | 11:17 |
| 84. | Super Mario Galaxy 2 | 843 | 0.07% | 2 | 17:51 |
| 85. | Mega Man Zero 3 | 776 | 0.07% | 2 | 15:37 |
| 86. | Harvest Moon: Friends of Mineral Town | 714 | 0.06% | 1 | 5:02 |
| 87. | Fire Emblem: The Sacred Stones | 703 | 0.06% | 2 | 15:02 |
| 88. | New Super Mario Bros. Wii | 679 | 0.06% | 2 | 20:49 |
| 89. | Super Metroid | 672 | 0.06% | 1 | 6:46 |
| 90. | Super Mario Galaxy | 654 | 0.06% | 2 | 20:19 |
| 91. | Final Fantasy II | 640 | 0.05% | 1 | 1:53 |
| 92. | Harvest Moon | 631 | 0.05% | 1 | 1:14 |
| 93. | Sparkster | 618 | 0.05% | 1 | 5:20 |
| 94. | Klonoa: Empire of Dreams | 608 | 0.05% | 1 | 6:34 |
| 95. | Star Ocean | 573 | 0.05% | 1 | 2:40 |
| 96. | Kingdom Hearts: Chain of Memories | 525 | 0.04% | 1 | 1:58 |
| 97. | Mega Man Zero 4 | 513 | 0.04% | 2 | 12:39 |
| 98. | Mega Man X3 | 507 | 0.04% | 1 | 4:56 |
| 99. | Sigma Star Saga | 506 | 0.04% | 1 | 14:32 |
| 100. | Lufia: The Legend Returns | 492 | 0.04% | 1 | 4:38 |
