| 1. | Final Fantasy VI | 182,924 | 17.87% | 7 | 18:11 |
| 2. | Breath of Fire IV | 102,028 | 9.97% | 4 | 10:15 |
| 3. | Lufia II: Rise of the Sinistrals | 83,382 | 8.14% | 6 | 16:02 |
| 4. | Breath of Fire III | 68,452 | 6.69% | 4 | 8:23 |
| 5. | Treasure of the Rudras | 66,432 | 6.49% | 6 | 9:41 |
| 6. | Phantasy Star Online | 37,403 | 3.65% | 65 | 3:24:04 |
| 7. | Bomberman 64: The Second Attack! | 34,315 | 3.35% | 6 | 19:06 |
| 8. | Chrono Trigger | 28,120 | 2.75% | 5 | 16:17 |
| 9. | Final Fantasy Crystal Chronicles | 27,990 | 2.73% | 6 | 25:58 |
| 10. | Super Mario Advance 4: Super Mario Bros. 3 | 27,981 | 2.73% | 4 | 7:16 |
| 11. | Bahamut Lagoon | 23,702 | 2.32% | 3 | 5:46 |
| 12. | Donkey Kong 64 | 21,988 | 2.15% | 5 | 19:01 |
| 13. | Sword of Mana | 21,664 | 2.12% | 3 | 5:59 |
| 14. | Pokémon FireRed and LeafGreen | 20,210 | 1.97% | 3 | 6:46 |
| 15. | The 7th Saga | 17,269 | 1.69% | 3 | 7:40 |
| 16. | SaGa Frontier 2 | 16,899 | 1.65% | 5 | 20:02 |
| 17. | Conker's Bad Fur Day | 16,417 | 1.60% | 6 | 25:52 |
| 18. | Legend of Mana | 15,909 | 1.55% | 7 | 19:30 |
| 19. | Tales of Destiny | 11,555 | 1.13% | 4 | 5:58 |
| 20. | Digimon World 4 | 8,271 | 0.81% | 5 | 10:58 |
| 21. | Final Fantasy II | 8,227 | 0.80% | 2 | 3:51 |
| 22. | Aidyn Chronicles: The First Mage | 8,195 | 0.80% | 5 | 19:02 |
| 23. | Super Mario Bros. 2 | 7,780 | 0.76% | 2 | 2:04 |
| 24. | Final Fantasy V | 7,503 | 0.73% | 6 | 18:20 |
| 25. | Rayman 2: The Great Escape | 7,406 | 0.72% | 4 | 14:05 |
| 26. | Final Fantasy Tactics Advance | 5,570 | 0.54% | 4 | 7:31 |
| 27. | Mario Power Tennis | 4,678 | 0.46% | 5 | 34:23 |
| 28. | Final Fantasy IX | 4,315 | 0.42% | 6 | 19:28 |
| 29. | Quest 64 | 4,214 | 0.41% | 6 | 16:17 |
| 30. | Kirby & the Amazing Mirror | 3,926 | 0.38% | 4 | 11:03 |
| 31. | Kirby 64: The Crystal Shards | 3,921 | 0.38% | 6 | 16:01 |
| 32. | Jet Force Gemini | 3,795 | 0.37% | 6 | 15:31 |
| 33. | Glover | 3,774 | 0.37% | 4 | 16:34 |
| 34. | Seiken Densetsu 3 | 3,649 | 0.36% | 3 | 10:51 |
| 35. | Romancing SaGa 3 | 3,575 | 0.35% | 5 | 13:32 |
| 36. | The Legend of Dragoon | 2,533 | 0.25% | 5 | 7:51 |
| 37. | Amazing Island | 2,468 | 0.24% | 6 | 26:57 |
| 38. | Final Fantasy VIII | 2,169 | 0.21% | 7 | 27:37 |
| 39. | Final Fantasy | 2,024 | 0.20% | 1 | 2:17 |
| 40. | Kirby's Dream Land 3 | 1,997 | 0.20% | 5 | 11:11 |
| 41. | Mario Party 5 | 1,956 | 0.19% | 5 | 9:18 |
| 42. | Animal Crossing | 1,925 | 0.19% | 5 | 12:57 |
| 43. | Mario Party 4 | 1,914 | 0.19% | 4 | 12:07 |
| 44. | Mario Tennis | 1,862 | 0.18% | 4 | 10:24 |
| 45. | Super Mario World | 1,746 | 0.17% | 6 | 10:12 |
| 46. | Kirby Air Ride | 1,724 | 0.17% | 6 | 20:55 |
| 47. | Castlevania: Legacy of Darkness | 1,659 | 0.16% | 3 | 7:42 |
| 48. | Paper Mario: The Thousand-Year Door | 1,638 | 0.16% | 6 | 11:44 |
| 49. | Chocobo Racing | 1,626 | 0.16% | 3 | 5:49 |
| 50. | Paper Mario | 1,608 | 0.16% | 6 | 14:20 |
| 51. | Bomberman Hero | 1,487 | 0.15% | 4 | 8:29 |
| 52. | Super Mario Bros. | 1,423 | 0.14% | 2 | 3:47 |
| 53. | Mario & Luigi: Superstar Saga | 1,404 | 0.14% | 5 | 9:32 |
| 54. | Shining Soul II | 1,376 | 0.13% | 1 | 1:19 |
| 55. | Bomberman 64 | 1,370 | 0.13% | 6 | 9:30 |
| 56. | GoldenEye 007 | 1,345 | 0.13% | 4 | 8:59 |
| 57. | Perfect Dark | 1,326 | 0.13% | 6 | 7:58 |
| 58. | Valkyrie Profile | 1,215 | 0.12% | 5 | 8:01 |
| 59. | Final Fantasy IV | 1,207 | 0.12% | 4 | 7:00 |
| 60. | Frog Hop | 1,195 | 0.12% | 1 | 1:14 |
| 61. | Breath of Fire | 1,188 | 0.12% | 2 | 3:04 |
| 62. | Star Fox | 1,169 | 0.11% | 5 | 10:49 |
| 63. | The Legend of Zelda: Majora's Mask | 1,140 | 0.11% | 7 | 14:59 |
| 64. | Breath of Fire II | 1,132 | 0.11% | 2 | 3:08 |
| 65. | Luigi's Mansion | 1,097 | 0.11% | 6 | 17:04 |
| 66. | Silent Hill | 1,090 | 0.11% | 5 | 11:46 |
| 67. | Snowboard Kids | 1,066 | 0.10% | 3 | 6:53 |
| 68. | The Legend of Zelda: A Link to the Past | 1,013 | 0.10% | 5 | 9:14 |
| 69. | Kirby Super Star | 986 | 0.10% | 6 | 11:56 |
| 70. | Mario Golf: Toadstool Tour | 962 | 0.09% | 4 | 21:33 |
| 71. | The Legend of Zelda: Four Swords Adventures | 960 | 0.09% | 6 | 45:23 |
| 72. | Final Fantasy VII | 945 | 0.09% | 6 | 22:35 |
| 73. | Mario Kart: Double Dash!! | 928 | 0.09% | 5 | 26:23 |
| 74. | The Legend of Zelda: Ocarina of Time | 915 | 0.09% | 6 | 11:17 |
| 75. | Chameleon Twist | 902 | 0.09% | 3 | 5:16 |
| 76. | Super Mario Kart | 832 | 0.08% | 5 | 20:31 |
| 77. | Earthbound | 817 | 0.08% | 5 | 12:04 |
| 78. | Mischief Makers | 767 | 0.07% | 3 | 10:04 |
| 79. | Yoshi's Story | 731 | 0.07% | 4 | 9:24 |
| 80. | Tales of Eternia | 691 | 0.07% | 1 | 1:33 |
| 81. | Sonic Battle | 674 | 0.07% | 3 | 10:08 |
| 82. | Super Mario RPG | 645 | 0.06% | 6 | 11:29 |
| 83. | Super Mario 64 | 622 | 0.06% | 6 | 16:17 |
| 84. | Mario Party 3 | 589 | 0.06% | 4 | 6:19 |
| 85. | Mario Golf | 582 | 0.06% | 3 | 12:08 |
| 86. | Super Smash Bros. | 575 | 0.06% | 4 | 8:41 |
| 87. | Donkey Kong Country 2 | 556 | 0.05% | 4 | 9:45 |
| 88. | Diddy Kong Racing | 512 | 0.05% | 6 | 17:28 |
| 89. | MediEvil | 506 | 0.05% | 3 | 6:33 |
| 90. | WarioWare, Inc.: Mega Microgames! | 466 | 0.05% | 1 | 1:18 |
| 91. | Metal Gear Solid | 462 | 0.05% | 4 | 12:08 |
| 92. | Metroid Prime | 458 | 0.04% | 6 | 20:34 |
| 93. | Star Fox 64 | 426 | 0.04% | 5 | 10:33 |
| 94. | The Legend of Zelda: Twilight Princess | 422 | 0.04% | 5 | 27:28 |
| 95. | Billy Hatcher and the Giant Egg | 420 | 0.04% | 2 | 9:17 |
| 96. | Sonic Advance 2 | 415 | 0.04% | 2 | 4:30 |
| 97. | F-Zero GX | 412 | 0.04% | 6 | 20:12 |
| 98. | Mario Kart 64 | 408 | 0.04% | 4 | 19:02 |
| 99. | Banjo-Kazooie | 406 | 0.04% | 5 | 23:50 |
| 100. | Banjo-Tooie | 388 | 0.04% | 6 | 23:52 |
