| 1. | Live A Live | 1,875,743 | 13.74% | 23 | 17:27:05 |
| 2. | The Legend of the Mystical Ninja | 1,378,704 | 10.10% | 1 | 39:14 |
| 3. | Castlevania: Symphony of the Night | 1,050,292 | 7.70% | 4 | 4:40:42 |
| 4. | The Great Battle III | 812,633 | 5.95% | 1 | 1:16:38 |
| 5. | The Great Battle IV | 473,293 | 3.47% | 1 | 1:25:29 |
| 6. | The Great Battle II: Last Fighter Twin | 271,359 | 1.99% | 1 | 50:09 |
| 7. | Valkyrie Profile | 257,085 | 1.88% | 25 | 17:31:59 |
| 8. | Grandia | 248,752 | 1.82% | 25 | 16:54:01 |
| 9. | The Great Battle V | 225,111 | 1.65% | 1 | 1:03:13 |
| 10. | Brave Fencer Musashi | 195,869 | 1.44% | 6 | 7:27:21 |
| 11. | SD the Great Battle | 191,741 | 1.40% | 1 | 31:52 |
| 12. | Treasure of the Rudras | 175,885 | 1.29% | 46 | 23:36:15 |
| 13. | Legend of Mana | 173,993 | 1.27% | 26 | 17:05:33 |
| 14. | Front Mission Series: Gun Hazard | 157,724 | 1.16% | 13 | 10:24:03 |
| 15. | Bloodstained: Curse of the Moon 2 | 157,034 | 1.15% | 3 | 2:54:44 |
| 16. | Wai Wai World | 150,321 | 1.10% | 2 | 2:03:04 |
| 17. | Mystic Ark | 131,545 | 0.96% | 8 | 9:18:32 |
| 18. | Final Fantasy Mystic Quest | 110,251 | 0.81% | 8 | 4:17:47 |
| 19. | Dragon Ball 3: Gokuden | 105,870 | 0.78% | 1 | 1:36:33 |
| 20. | Vagrant Story | 105,151 | 0.77% | 12 | 5:39:34 |
| 21. | Wild Arms | 97,354 | 0.71% | 30 | 10:56:20 |
| 22. | G-Darius | 94,241 | 0.69% | 1 | 1:30:32 |
| 23. | Landstalker | 89,570 | 0.66% | 7 | 4:26:37 |
| 24. | Tactics Ogre: Let Us Cling Together | 75,128 | 0.55% | 27 | 15:06:36 |
| 25. | Trials of Mana | 71,024 | 0.52% | 24 | 1:00:05:16 |
| 26. | Treasure Hunter G | 70,241 | 0.51% | 18 | 12:15:03 |
| 27. | Demon's Crest | 69,543 | 0.51% | 7 | 2:08:28 |
| 28. | Solatorobo: Red the Hunter | 69,202 | 0.51% | 21 | 13:56:15 |
| 29. | Wario Land: Super Mario Land 3 | 56,783 | 0.42% | 7 | 3:04:07 |
| 30. | Super Castlevania IV | 54,611 | 0.40% | 1 | 1:21:31 |
| 31. | Illusion of Gaia | 52,869 | 0.39% | 10 | 6:18:35 |
| 32. | Soul Blazer | 52,121 | 0.38% | 7 | 4:06:18 |
| 33. | ActRaiser 2 | 48,881 | 0.36% | 1 | 1:11:58 |
| 34. | The Great Battle VI | 46,454 | 0.34% | 1 | 0:00 |
| 35. | Whirlo | 44,853 | 0.33% | 1 | 1:34:52 |
| 36. | Emerald Dragon | 43,740 | 0.32% | 12 | 6:28:08 |
| 37. | Final Fantasy Legend III | 43,458 | 0.32% | 2 | 16:43 |
| 38. | Alundra | 43,177 | 0.32% | 19 | 11:26:08 |
| 39. | Final Fantasy II | 40,723 | 0.30% | 14 | 7:17:10 |
| 40. | E.V.O.: Search for Eden | 39,459 | 0.29% | 5 | 2:49:55 |
| 41. | Assault Suits Valken | 37,202 | 0.27% | 1 | 1:07:43 |
| 42. | Keroro RPG: Kishi to Musha to Densetsu no Kaizoku | 37,128 | 0.27% | 1 | 5:43 |
| 43. | Tail Concerto | 36,084 | 0.26% | 8 | 3:05:29 |
| 44. | Tales of Phantasia | 32,787 | 0.24% | 15 | 11:19:05 |
| 45. | Energy Breaker | 30,745 | 0.23% | 23 | 18:51:05 |
| 46. | Alcahest | 30,647 | 0.22% | 4 | 2:04:42 |
| 47. | Final Fantasy III | 30,392 | 0.22% | 14 | 9:18:09 |
| 48. | Final Fantasy | 30,214 | 0.22% | 8 | 4:58:47 |
| 49. | Soukaigi | 29,674 | 0.22% | 10 | 3:44:29 |
| 50. | Monster World IV | 29,316 | 0.21% | 6 | 2:36:57 |
| 51. | Final Fantasy V | 27,836 | 0.20% | 27 | 19:12:59 |
| 52. | Ninja Gaiden II: The Dark Sword of Chaos | 26,082 | 0.19% | 1 | 51:06 |
| 53. | Batman: The Video Game | 26,062 | 0.19% | 1 | 26:04 |
| 54. | Popful Mail | 24,029 | 0.18% | 5 | 3:25:37 |
| 55. | Final Fantasy VI | 23,530 | 0.17% | 26 | 18:45:03 |
| 56. | Chaos Seed | 23,034 | 0.17% | 10 | 10:35:22 |
| 57. | Secret of Mana | 22,470 | 0.16% | 15 | 8:27:39 |
| 58. | The Goonies | 21,319 | 0.16% | 1 | 22:31 |
| 59. | Blaster Master: Blasting Again | 21,092 | 0.15% | 1 | 4:09:47 |
| 60. | Kendo Rage | 20,756 | 0.15% | 1 | 0:00 |
| 61. | Mega Man Legends | 20,666 | 0.15% | 11 | 5:38:12 |
| 62. | Ys V: Lost Kefin, Kingdom of Sand | 20,633 | 0.15% | 8 | 4:32:22 |
| 63. | Shovel Knight | 20,386 | 0.15% | 6 | 2:48:42 |
| 64. | Ninja-Kid | 19,828 | 0.15% | 3 | 1:53:34 |
| 65. | Blaster Master | 19,616 | 0.14% | 1 | 1:21:07 |
| 66. | Ys III: Wanderers from Ys | 19,258 | 0.14% | 4 | 1:40:56 |
| 67. | Teenage Mutant Ninja Turtles | 17,386 | 0.13% | 1 | 30:30 |
| 68. | Terranigma | 16,191 | 0.12% | 15 | 6:14:55 |
| 69. | Mega Man | 14,952 | 0.11% | 14 | 1:49:38 |
| 70. | Tenshi no Uta | 14,489 | 0.11% | 14 | 4:59:17 |
| 71. | ActRaiser | 14,230 | 0.10% | 1 | 1:38:58 |
| 72. | Super Adventure Island II | 13,650 | 0.10% | 1 | 1:16:23 |
| 73. | Lufia II: Rise of the Sinistrals | 13,242 | 0.10% | 14 | 9:53:32 |
| 74. | From the Abyss | 13,221 | 0.10% | 10 | 3:44:09 |
| 75. | The Magical Quest Starring Mickey Mouse | 12,823 | 0.09% | 1 | 37:25 |
| 76. | Gunstar Heroes | 12,767 | 0.09% | 1 | 1:02:47 |
| 77. | Kero Blaster | 12,672 | 0.09% | 2 | 2:32:01 |
| 78. | Ninja Gaiden | 12,620 | 0.09% | 1 | 43:31 |
| 79. | Ninja Five-O | 12,402 | 0.09% | 2 | 47:03 |
| 80. | Super Double Dragon | 12,139 | 0.09% | 1 | 50:59 |
| 81. | The Legend of Zelda: Link's Awakening | 11,023 | 0.08% | 8 | 3:57:14 |
| 82. | Tadaima Yuusha Boshuuchuu Okawari | 10,566 | 0.08% | 3 | 8:20:34 |
| 83. | Faxanadu | 10,506 | 0.08% | 1 | 1:16:16 |
| 84. | Magical Pop'n | 10,332 | 0.08% | 1 | 56:57 |
| 85. | Grandia II | 10,300 | 0.08% | 1 | 51:08 |
| 86. | The Adventure of Little Ralph | 10,083 | 0.07% | 1 | 1:23:45 |
| 87. | Disney's Magical Quest 3 starring Mickey and Donald | 9,976 | 0.07% | 1 | 1:08:31 |
| 88. | Magic Sword | 9,783 | 0.07% | 1 | 1:03:18 |
| 89. | Bloodstained: Curse of the Moon | 9,304 | 0.07% | 2 | 1:47:04 |
| 90. | Grandia III | 9,198 | 0.07% | 1 | 54:22 |
| 91. | Wild Guns | 9,093 | 0.07% | 1 | 32:46 |
| 92. | Super Dimension Fortress Macross: Scrambled Valkyrie | 8,964 | 0.07% | 1 | 41:56 |
| 93. | Gyruss | 8,570 | 0.06% | 1 | 38:29 |
| 94. | Super Adventure Island | 8,504 | 0.06% | 1 | 26:57 |
| 95. | Castlevania: Dracula X | 8,412 | 0.06% | 1 | 36:55 |
| 96. | Xak: The Art of Visual Stage | 7,609 | 0.06% | 2 | 1:35:11 |
| 97. | The King of Dragons | 7,563 | 0.06% | 1 | 56:33 |
| 98. | The Twisted Tales of Spike McFang | 7,400 | 0.05% | 1 | 1:35:22 |
| 99. | Beyond Oasis | 7,087 | 0.05% | 1 | 2:12:30 |
| 100. | Ruin Arm | 6,749 | 0.05% | 10 | 4:43:31 |
