| 1. | Shining Force | 1,394 | 7.98% | 49 | 3:00:42:43 |
| 2. | Mega Man | 696 | 3.99% | 12 | 1:18:26:53 |
| 3. | Mega Man X7 | 460 | 2.63% | 1 | 6:28:58 |
| 4. | Senkyu | 330 | 1.89% | 1 | 1:07:58 |
| 5. | Puyo Puyo 2 | 191 | 1.09% | 6 | 7:37:16 |
| 6. | Sonic the Hedgehog 3 | 190 | 1.09% | 1 | 0:13 |
| 7. | Super Mario 64 | 182 | 1.04% | 10 | 2:15:32 |
| 8. | Sonic the Hedgehog | 166 | 0.95% | 5 | 11:28:04 |
| 9. | Puchi Carat | 165 | 0.95% | 1 | 36:59 |
| 10. | Dance Dance Revolution 4thMix | 163 | 0.93% | 4 | 20:35:16 |
| 11. | Super Mario RPG | 162 | 0.93% | 6 | 1:03:08:10 |
| 12. | Castlevania: Portrait of Ruin | 157 | 0.90% | 3 | 16:21 |
| 13. | ActRaiser 2 | 155 | 0.89% | 5 | 16:09:55 |
| 14. | Mega Man 3 | 152 | 0.87% | 13 | 19:08:27 |
| 15. | Banjo-Tooie | 132 | 0.76% | 11 | 58:23 |
| 16. | Super Mario Bros. 3 | 130 | 0.74% | 2 | 4:53:53 |
| 17. | Castlevania: Aria of Sorrow | 122 | 0.70% | 6 | 22:17:04 |
| 18. | Sailor Moon | 116 | 0.66% | 2 | 7:27:01 |
| 19. | Monster Slider | 116 | 0.66% | 1 | 35:35 |
| 20. | Puyo Pop Fever | 106 | 0.61% | 1 | 5:56:22 |
| 21. | Castlevania: Symphony of the Night | 106 | 0.61% | 4 | 2:09:22 |
| 22. | Mega Man 8 | 106 | 0.61% | 5 | 17:32:28 |
| 23. | Um Jammer Lammy | 102 | 0.58% | 11 | 5:04:10 |
| 24. | Puzzle Bobble 2 | 100 | 0.57% | 4 | 5:21:08 |
| 25. | Castlevania: Rondo of Blood | 98 | 0.56% | 11 | 5:05:31 |
| 26. | Super Smash Bros. Ultimate | 95 | 0.54% | 4 | 9:59:57 |
| 27. | Parasite Eve | 91 | 0.52% | 4 | 12:48:08 |
| 28. | Neo Turf Masters | 90 | 0.52% | 4 | 7:15:41 |
| 29. | Mega Man 2 | 90 | 0.52% | 6 | 21:31:48 |
| 30. | SONOHIGURASHI VS. TOUHOU UNIVERSE | 87 | 0.50% | 1 | 3:28:12 |
| 31. | Quest 64 | 85 | 0.49% | 3 | 15:53:12 |
| 32. | Super Mario World | 83 | 0.48% | 6 | 1:00:39:24 |
| 33. | Mega Man X | 83 | 0.48% | 7 | 22:02:27 |
| 34. | Etrian Odyssey IV | 82 | 0.47% | 3 | 1:09:09 |
| 35. | Elite Beat Agents | 81 | 0.46% | 1 | 2:31:29 |
| 36. | Bomberman Fantasy Race | 80 | 0.46% | 2 | 11:50:56 |
| 37. | I Wanna Be the Guy | 74 | 0.42% | 5 | 1:12:59 |
| 38. | Rhythm Heaven | 71 | 0.41% | 3 | 20:57:48 |
| 39. | Pepsiman | 71 | 0.41% | 2 | 1:14:44 |
| 40. | DJMax Trilogy | 71 | 0.41% | 3 | 7:56 |
| 41. | Puyo Puyo Tetris | 70 | 0.40% | 2 | 3:46:40 |
| 42. | Double Dragon | 68 | 0.39% | 1 | 19:30 |
| 43. | Azumanga Daioh Puzzle Bobble | 68 | 0.39% | 1 | 1:24:43 |
| 44. | Pop'n Pop | 67 | 0.38% | 1 | 1:07:16 |
| 45. | Rabi-Ribi | 64 | 0.37% | 7 | 1:20:08:11 |
| 46. | Flicky | 61 | 0.35% | 1 | 18:58 |
| 47. | Mario Kart DS | 60 | 0.34% | 2 | 6:21:48 |
| 48. | Sonic the Hedgehog 2 | 58 | 0.33% | 3 | 5:02:20 |
| 49. | WarioWare, Inc.: Mega Microgames! | 57 | 0.33% | 3 | 15:30:59 |
| 50. | Super Mario Advance 4: Super Mario Bros. 3 | 57 | 0.33% | 4 | 11:08:56 |
| 51. | Landmaker | 55 | 0.32% | 1 | 1:25:53 |
| 52. | Castlevania: Order of Ecclesia | 54 | 0.31% | 6 | 23:04 |
| 53. | Sonic R | 53 | 0.30% | 2 | 6:11:16 |
| 54. | Wario Land 4 | 52 | 0.30% | 3 | 10:27:18 |
| 55. | Hollow Knight | 52 | 0.30% | 30 | 2:05:31:01 |
| 56. | Diddy Kong Racing | 51 | 0.29% | 5 | 17:06:21 |
| 57. | Touhou Blooming Chaos 2 | 49 | 0.28% | 1 | 4:33:16 |
| 58. | Kirby: Nightmare in Dream Land | 49 | 0.28% | 5 | 10:26:22 |
| 59. | CrossCode | 48 | 0.27% | 8 | 1:22:02:34 |
| 60. | Viewtiful Joe | 48 | 0.27% | 5 | 22:09:03 |
| 61. | Kid Dracula | 47 | 0.27% | 1 | 5:17:09 |
| 62. | Mega Man 7 | 47 | 0.27% | 6 | 10:06:24 |
| 63. | Ghouls 'n Ghosts | 46 | 0.26% | 4 | 3:40:36 |
| 64. | Doki Doki Penguin Land | 46 | 0.26% | 1 | 24:01 |
| 65. | Hebereke's Popoon | 45 | 0.26% | 1 | 49:20 |
| 66. | Metal Gear Solid | 45 | 0.26% | 3 | 10:52:39 |
| 67. | Mario Party | 45 | 0.26% | 10 | 2:06:23:53 |
| 68. | Mega Man 4 | 45 | 0.26% | 4 | 13:55:46 |
| 69. | Mabinogi | 44 | 0.25% | 2 | 7:46:17 |
| 70. | Super Animal Royale | 44 | 0.25% | 2 | 5:40:39 |
| 71. | Dino Rex | 43 | 0.25% | 2 | 3:58:46 |
| 72. | Super Mario World 2: Yoshi's Island | 43 | 0.25% | 4 | 16:43:54 |
| 73. | Mega Man: The Power Battle | 43 | 0.25% | 5 | 9:16:40 |
| 74. | Donkey Kong Country | 43 | 0.25% | 5 | 23:25:24 |
| 75. | Pnickies | 42 | 0.24% | 1 | 11:59 |
| 76. | Cleopatra Fortune | 42 | 0.24% | 2 | 2:20:50 |
| 77. | Sexy Parodius | 41 | 0.23% | 1 | 1:33:29 |
| 78. | Digimon Rumble Arena | 41 | 0.23% | 2 | 11:52:25 |
| 79. | Bloodstained: Ritual of the Night | 41 | 0.23% | 12 | 2:02:30:45 |
| 80. | Contra: Hard Corps | 41 | 0.23% | 8 | 4:47:33 |
| 81. | Kirby 64: The Crystal Shards | 41 | 0.23% | 2 | 8:59:47 |
| 82. | Dragon Ball Z: Buu's Fury | 40 | 0.23% | 2 | 12:38:52 |
| 83. | Cosmo Gang the Puzzle | 40 | 0.23% | 1 | 12:03 |
| 84. | Earthbound | 40 | 0.23% | 5 | 1:03:02:15 |
| 85. | Mega Man X2 | 40 | 0.23% | 6 | 3:41:19 |
| 86. | Yu-Gi-Oh! True Duel Monsters: Sealed Memories | 39 | 0.22% | 2 | 7:12:09 |
| 87. | Action 52 | 37 | 0.21% | 9 | 2:57:18 |
| 88. | Bomberman: Panic Bomber | 35 | 0.20% | 1 | 58:40 |
| 89. | Super Ledgehop: Double Laser | 33 | 0.19% | 1 | 2:18:11 |
| 90. | Mario Party 3 | 33 | 0.19% | 1 | 2:32:27 |
| 91. | Dragon Ball Z: The Legacy of Goku II | 32 | 0.18% | 3 | 15:56:07 |
| 92. | Robotrek | 32 | 0.18% | 4 | 23:27:33 |
| 93. | Monster Maulers | 32 | 0.18% | 2 | 1:10:30 |
| 94. | Star Fox | 32 | 0.18% | 1 | 5:59 |
| 95. | Adventure Island II | 31 | 0.18% | 1 | 8:28 |
| 96. | Mega Man 2: The Power Fighters | 30 | 0.17% | 2 | 6:13:13 |
| 97. | Gunstar Super Heroes | 30 | 0.17% | 3 | 7:27:17 |
| 98. | A.B. Cop | 29 | 0.17% | 1 | 35:46 |
| 99. | Zombies Ate My Neighbors | 29 | 0.17% | 2 | 9:00:30 |
| 100. | Ragnarok Battle Offline | 28 | 0.16% | 1 | 6:00:14 |
