transXpress: a Snakemake pipeline for streamlined de novo transcriptome assembly and ... | RTCL.TV

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Published on ● Video Link: https://www.youtube.com/watch?v=clwGfoUDbNo


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### Keywords ###
#Denovotranscriptomeassembly #RNAseq #Nonmodelorganisms #Transcriptomeannotation #Differentialexpressionanalysis #Reproduciblesoftware #RTCLTV #shorts

### Article Attribution ###
Title: transXpress: a Snakemake pipeline for streamlined de novo transcriptome assembly and annotation
Authors: Timothy R. Fallon, Tereza Čalounová, Martin Mokrejš, Jing-Ke Weng ,and Tomáš Pluskal
Publisher: BMC
DOI: 10.1186/s12859-023-05254-8
DOAJ URL: https://doaj.org/article/d93eded9aae04aa187bcae13e6236923
Source URL: https://doi.org/10.1186/s12859-023-05254-8



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### Video Timestamps ###
0:00:00 - Summary
0:00:28 - Title
0:00:35 - End



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Tags:
De novo transcriptome assembly
Differential expression analysis
Nonmodel organisms
RNAseq
RTCLTV
Reproducible software
Transcriptome annotation
shorts